Gene Mchl_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0918 
SymbolprfA 
ID7115995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp935298 
End bp936383 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content69% 
IMG OID643523721 
Productpeptide chain release factor 1 
Protein accessionYP_002419764 
Protein GI218528948 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.629192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCA TTCCTTCCGA TCGCCTCGAC GCCATCCTGG CGCGGCACGA CATCGTCACG 
GCGCAACTCG CCGACGGTTC GGCCGATGCC GGGAGCATCG TGCAACTCTC CCGCGAATTG
TCCGAACTCG ACGGCGTCGT GGCCGCGATC CATCATTACC GGCTGGCGGA GGCCAACCTC
GCTGGCATCC GGGCGATGAT CGACGAGCCG GGCGGCGATC CCGAGATGCG CGCGCTCGCC
GCCGAGGAGA AGCCGGAGGC CGAGGAGGCG CTCGAACAGG CCCACCGCGC GCTGCAGCTG
ATCCTGCTGC CCAAGGATGC CGCCGACGAG AAGAGCGCGA TCCTCGAAAT CCGCGCCGGC
ACCGGCGGTG ACGAGGCGGC CCTGTTCGCA GGTGACCTGT TTCGCATGTA CGCGCGCTAC
GCCGAGTCGA AGGGCTGGCG CGTCGAGGTG ATCTCGGAGA GCGAGGGCAC GGCCGGCGGC
TATCGCGAAG TCGTGGCCGA AGTGAAGGGC CGCAGCGTGT TCTCGCGCCT CAAGTTCGAG
AGCGGGGCCC ACCGCGTCCA GCGCGTGCCC GACACCGAGA CGCAGGGGCG CATTCACACC
TCCGCCGCCA CCGTCGCGGT GCTGCCCGAG GCGGAAGAGG TCGACATCGT CGTCAACGAG
GCCGACCTGA AGATCGACAC CATGCGGGCG CAGGGCGCGG GCGGCCAGCA CGTCAACAAG
ACGGAATCGG CGATCCGCAT CACGCATATT CCGACCGGCG TGGTGGTGTT CGTCCAAGAG
GAGCGCTCGC AGCACAAGAA CCGCGCCCGG GCGATGTCCC TCCTGCGCTC GAAGCTGTTC
GACGCCGAGC GCACCGCCAA GGACTCGGCA CGGGCCGCCG ACCGCAAGGC GCAGGTCGGC
TCCGGCGACC GTTCGGAGCG CATCCGCACC TACAATTTCC CGCAAGGCCG CGTCACCGAC
CACCGCATCA ACCTGACCCT CTACAAGCTG GAGGAGGTCA TGGCCGGACA GGCGCTCGAC
GAGGTGATCG ACGCCCTGGT GACCGAGCAT CAGGCCGAGT TGCTGGCCGC CGAGGGAATG
GCGTGA
 
Protein sequence
MTPIPSDRLD AILARHDIVT AQLADGSADA GSIVQLSREL SELDGVVAAI HHYRLAEANL 
AGIRAMIDEP GGDPEMRALA AEEKPEAEEA LEQAHRALQL ILLPKDAADE KSAILEIRAG
TGGDEAALFA GDLFRMYARY AESKGWRVEV ISESEGTAGG YREVVAEVKG RSVFSRLKFE
SGAHRVQRVP DTETQGRIHT SAATVAVLPE AEEVDIVVNE ADLKIDTMRA QGAGGQHVNK
TESAIRITHI PTGVVVFVQE ERSQHKNRAR AMSLLRSKLF DAERTAKDSA RAADRKAQVG
SGDRSERIRT YNFPQGRVTD HRINLTLYKL EEVMAGQALD EVIDALVTEH QAELLAAEGM
A