| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0910 |
|---|
| Symbol | |
|---|
| ID | 7115987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 923646 |
|---|
| End bp | 925790 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643523713 |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_002419756 |
|---|
| Protein GI | 218528940 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.31516 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCGC AGGCCGAAGG TCAGGAAGTC GCCGGTCGGC AGACGGTTCT GGGAAGCGGG
CAGGGCGGCC GAGAGACGGT TGGCAGGCAC TTGCTGCGGA CAGGCTCGGG ACTCTGCCTG
ACCGTCGCCG GCTTTTCTGC CACCGCGCTG ATGGCCTCGC TCTCCGCCGA GCCGACCCTG
AGGCTCACGG TTGTCGGGGG CGCGACTATC CTCGCTCTCG TTCTCGTCTG CCTGATCCTG
CGCCGGCTCG CCCGCAGCCT CACCCGCGCG ATGCAGGCCG CCGAAAGCAT CGCCCCGGCG
AGTGCTCCCG CCGTCGCGCT CCGGACTCTC CCGGCATCTG CCTCCGGCGA GGCCCCACTT
CCCGACGGGC GCCGCCTACT CGCCGACCGC CCTCGGCTCG GTGACGGGGC CGATCCGGCC
ATCCTCACCG ACATTGCGGC CCTGAAGCTT CGCGAGGACG CGTTGAGCGA TCGCATCGCC
CGGTTGAACG CGGCGCTCGA TACCCTCTCC CTCGGCTTCC TTCTCTACGA TCGCGATCAC
CGGCTGCTGG TGGTCAACCG CCGCTACCAC GAGATCTACA GGCTTCCGCC GGGGGCCGTG
ACCCCCGGCA TGTCGGCGCT GGAGGTGCTG CGCAGCAATG TCGGAGTCGG CGATCAGCCG
GACCGGAGCG AGGACGAGTG CATTGCCGAG ATCGGCGTAA TGATGGGGGC CGATGCCGTG
CCGACCCAGA TCCAGCATCT CGCCGACGGA CGCGTCGTTG CCGTCGAGAT CCAGCCGATT
GCCGGCGGCG GCTTCGTGGC GATCTACGAG GAAGCGACCG AACGCTGGAA CGCCGAGAAC
CGCATCGCCC ACATGGCCCG GCACGATGCC GTCACCGACC TGCCCAACCG CGTGTTGCTG
CGCGAGCGGA TCGAGGGGGC GATCACCCGG GCGCGGCGTG AGACCGGTTT CGCCGTGCTC
TGCCTCGACC TCGACAATTT CAAACAGGTC AACGACACCC TCGGCCACGC CGTCGGCGAC
GAATTGCTGC GGGCGGTGGC GCACCGCCTC AGGGCCTGCC TGCGCGAGGT CGACACCGTC
GCTCGTCTCG GCGGCGACGA GTTCGCGATC ATCCAGGCGA GCGTCGCGAC GCCGGCCGAT
GCCGCCACCC TGGCGCAACG CATCCTCGAC GTGGTCAGTG CTCCCTACGC GCTGACCCAT
CACTCCGTCA TCGTCGGCGT CAGTATCGGC ATCGCGCTCG CGCCCGGAGA CGGGCTGGAA
CCCGAGCGGC TGATGCAATG CGCCGACGTC GCCCTCTACC GCGCCAAGGA CGACGGGCGC
GGTGTGTTCC GGTTCTTCGA GGCGCAGATG GATGCCCGCC TCCAGGCCCG GCGCGCCCTC
GAACTCGACC TGCGCGCCGC CTTCGAGGCG GAGGCGTTCG ATCTGCATTA TCAGCCGATC
TACGACCTCG CCGAGGAGCG CATCAGCGGC TTCGAGGCGC TGCTGCGCTG GACCCACCCG
ACCCGTGGCC GGGTCTCACC GGCCGAGTTC GTGCCGCTCG CCGAGGAGAT CGGCCTCATC
GTGCCGCTGG GCGAGTGGGT GCTCCGCCGC GCCTGCCGTG AAGCCTCAAA CTGGCCGGAC
GGCCTCAAGG TCGCGGTCAA CGTCTCGGCG GCGCAGTTCA CCTCGATCGC GCTGATCGGA
ACGGTGCAGG CGGCGCTCGC CGAGAGCGGC CTCTCCGCCC GCCGTCTCGA ACTGGAGATC
ACCGAGAGCG TGCTGCTGGT GAACGGCAGC GCCACGGTGG CGATCCTGCA CGGGCTGCGG
GACCTCGGCG CCCGGATCGC TATGGACGAT TTCGGCACTG GCTATTCCAG CCTGAGCTAC
CTACGCAGCT TCCCCTTCGA CAAGATGAAG GTCGATCAGT CCTTCACCCG CGACCTGACG
GTGGAGCAGG GCTCCGGTTT CATCGTGCGG GCGGTGGTCA GCCTCGCTTC CAGCCTCGGG
ATGACGACGA CCGCGGAAGG CGTCGAGACA CCGGAGCAAC TCGCTTGGCT GCGCGAGGAG
GGCTGCGACG AGGTGCAAGG CTACCTGTTC AGCCCACCGG TGCCGGCGAG CGAACTCCCG
GCCCTGCTCG ATATCTGGAA CGGCCGGAAA CGCCGCGCCG CGTGA
|
|---|
| Protein sequence | MQAQAEGQEV AGRQTVLGSG QGGRETVGRH LLRTGSGLCL TVAGFSATAL MASLSAEPTL
RLTVVGGATI LALVLVCLIL RRLARSLTRA MQAAESIAPA SAPAVALRTL PASASGEAPL
PDGRRLLADR PRLGDGADPA ILTDIAALKL REDALSDRIA RLNAALDTLS LGFLLYDRDH
RLLVVNRRYH EIYRLPPGAV TPGMSALEVL RSNVGVGDQP DRSEDECIAE IGVMMGADAV
PTQIQHLADG RVVAVEIQPI AGGGFVAIYE EATERWNAEN RIAHMARHDA VTDLPNRVLL
RERIEGAITR ARRETGFAVL CLDLDNFKQV NDTLGHAVGD ELLRAVAHRL RACLREVDTV
ARLGGDEFAI IQASVATPAD AATLAQRILD VVSAPYALTH HSVIVGVSIG IALAPGDGLE
PERLMQCADV ALYRAKDDGR GVFRFFEAQM DARLQARRAL ELDLRAAFEA EAFDLHYQPI
YDLAEERISG FEALLRWTHP TRGRVSPAEF VPLAEEIGLI VPLGEWVLRR ACREASNWPD
GLKVAVNVSA AQFTSIALIG TVQAALAESG LSARRLELEI TESVLLVNGS ATVAILHGLR
DLGARIAMDD FGTGYSSLSY LRSFPFDKMK VDQSFTRDLT VEQGSGFIVR AVVSLASSLG
MTTTAEGVET PEQLAWLREE GCDEVQGYLF SPPVPASELP ALLDIWNGRK RRAA
|
|---|
| |