Gene Mchl_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0471 
Symbol 
ID7114627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp458924 
End bp462601 
Gene Length3678 bp 
Protein Length1225 aa 
Translation table11 
GC content70% 
IMG OID643523271 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002419335 
Protein GI218528519 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.221036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.153067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAA TGCGCAACGG CGAGGGCGTG CCGGCGTCCC TGCGCTTCCT TGAGGAGGGC 
GGGCAGACGG GCCGGGAGAT CCTGGCGTAT CCCTGGTCGG ACACACCGCT CGGTCCGCTG
GAGGATTGGC CGGTCTCCCT CCGCACGACG CTGGCGACGA TGCTGGCCTG CCCGGCCGCG
ATGTTCCTCG CCTGGGGACC CGAGGGGATT TCCTTCTTCA ACGATGCCTA CCGGCCAGTC
TTCGGCGACC GCTTGCCCCG GGCCCTCGGT GCGCGCTTTC GCGAGATCTG GGCCGACCTG
TGGGAGGATA TCGGCCCGCT GGTCGATGCC GCCCTGCGCG GCGAAAGCGT GGCCCAGCGC
AACCTGCCGC TCCTCATGGA CCGCTACGGG GTGCCCGAGG AGAGCTGGTG GAGCTTCACC
TATTCGCCGG TGCGCGACGA TGCGGGTCGC ATCAACGGCA TGATCTGCGT CACGGCGGAG
ACGACCGCCG AGGTGCTGGC CGAGCGCGCG CGCCGTCGCA GCGACGAGCG CCTTGAAATG
GCGCTCTCGG CCGGAGGCAG CATCGGCATC TGGGACTGGG ACGTCGCGGC CGATCGCGTC
ACCGCCGATC CGCGCTTTGC TGCGCTCTAT GGCGTCGATC CGGAGATGGC GGCGGCCGGG
GCGCCCATCG CCGCATTCTT TTCCGGGGTG CACCCCGACG ACCTGCCAAG CCTGAAAGCG
AGCATCGGGG CGGTCTTCGG CACGGGCGGG CAGTTCGATG CGGAGTACCG CCTCGTTCAG
GGCGATGGCA CCATCCGCTG GGTCGCCGCG CAGGGTCGCT GCACCCTCGG CGAGGATGGG
ACGCCGCGCC ACTTCCCAGG CGTCAGCTTC GACATCACCG AGCGCAAGCG CATCGAGCAG
GCGCTCCGCG ACAGCCAGGA CCGTTTCCGC GGCATCATCA ACTCGGTCGA TCAGATGATC
TGGTCGACGC GGCCCGACGG CTACCACGAC TTCTATAACG AGCGCTGGTA CGCGTACACC
GGCGTCCCCG CCGGCACGAC CGACGGCGAG GCCTGGAACG GGATGTTCCA TCCCGATGAC
CGTGAGCGGG CCTGGGCGGC ATGGCAGCAC GCCCTCGCCA CGGGTGAAAA CTACCAGATC
GAGTACCGCC TGCGGCACCG CTCCGGCCTC TACCGCTGGG TGCTCGGCCG GGCACAGCCG
GTGCGCGATC CGGAGGGGCG GATCGTGCGC TGGTTCGGCA CCTGCACCGA TATCCACGAC
CGCAAGCTCG CCGAAGAACG CCAAGCCTTC CTGCTCGGCC TGAACGACCG GCTGCGGGAG
GCGGACGAGC CGCAGGCGGT GACGCTGGCC GCGGCCGCGA CGCTCGGCGC CCATATCGGC
GTCGCGCGGG CCGGCTACGG CGAGATCGAC GAGACCGGCG AGATCGTGCG GGTCGAGCGC
GACTGGACCC GCGACCCGTC GGTGCCCAGC CTCGCGGGCG CGTCGCGCAT CCTCGACGGG
TTCGGCCCGG CGGTGATCGC GGAACTGCGG GCCGGGCTCA CCCTCGTGGT GGAGGATTGC
TACGCCGACC CGCGGGCCGG GCACGATTAT GCGGCGACGT GGGATTCGAT CGGCTGCCGC
TCTCTCGTCG TCGTGCCGCT GATCCGCGAG GGGCGGTTGC GGGCGATCCT CTACCTGCAC
GAGCCGAAGC CGCGAGTCTG GCGCGCCGAG GAGATCGGGC TGGTCGAGGA TGTCGCCCAG
CGCGTCGGCC ATGCTGCCGA GCGCGCCCGC GCGGAGCAGG CCGAGCGCGC CAACGCCCGC
GAACTGCGCC TGATTGCCGA TTCTCTGCCA GTCCTGATCG CCCTGTTCGA TGCGGACGGC
GTGTGCCGCT TCGCCAATGC CGCCAGCGCC GACTGGTTCG GCGTCGCCCC GGCGGAGTCG
GTCGGGCAGA CGCTCGCCGC GCTGATCGGG CCGGCGGATT TCGCCGAGGC GCGGCCACGC
TTCGAAAGCG CCCGCGCCGG CCGCGACGTG CGCGCCGAGC GGGCTTGGCC GCGCCGGGAC
GGCAGCCCGC GTATCGCCGA CATCCGCTAC CTGCCGCGAC CGATGCCGGA CGGCTCGACC
GACGGGGCCT ACCTGTTCGT CACCGACATC TCGGATGCCA AGCGCATCGA GGCGATGCTG
GAGCGCGAGG TCGGCGAGCG CACGCGCGAG CGCGACCGCC TCTGGCAGAC CACCAACGAC
CTGATGGGGA CGGCCGGCCT CGACGGCCAT CTCCGCAGCG TCAATCCGGC CTGGGGGCGC
CTGCTCGGCT GGAGCGAGCA GGAGCTGCTC GAACGCCCCT TCCTCGATTT CATCGACCCC
GAGGACCATG CCGGTACCGG TGCCGTGCTG GCACGGCTCG CCGGGAGCGA CCAGATCACC
GATTTCGTCG ATCGCATCCT CAGCAAGGAC GGACGCCGCC GCACGGTCAT GTGGACCGCG
GTGCCCGAGA GCGGCTGCTT CCACATCGTC GGCCGCGACA TCACCGACCA GCGCCTCGCC
GAGGAGCAAT TGCGGCAGGC GCAGAAGATG GAGGCGGTCG GCCAGTTGAC CGGCGGCATC
GCCCACGACT TCAACAACCT CCTGACGGGC ATCATCGGTT CGCTCGACCT GATGCAGACC
CGCATCGCCC AGGGCCGGAT CGACACCCTG GAGCGCTATG CCGGGGCGGC CCTCACCTCG
GCGCACCGGG CCGCGTCGCT GACCCATCGC CTGCTCGCTT TCGCCCGGCG CCAGCCGCTC
GAACAGAAGC CTGTCGATGT GAATGTGCTG CTGGCCGGCA TGGAGGAAAT GCTGCGGCGC
GCGCTCCCCG AGCAGGTCCA TCTCGACATC GTCGCGACGG AGGGCCTCTG GCCTACCCTC
TGCGATCCGC ACCAACTCGA GAACGCGGTG CTCAATCTCG CCATCAACGC GCGCGACGCC
ATGCCGGAGG GCGGCCGGCT CGTGGTCGAG ACCAGCAATG CCCATCTCGG GCCCGCCGAT
CTCCGCCTGC ATTCGGGCGC CCGCGAAGGT GCCTATGTCT GCATCCGCGT CACCGATACG
GGCCACGGCA TGCCGCCGGA GGTCGCGGCC CGGGCCTTCG AGCCGTTCTT CACGACCAAG
CCCCTCGGCA TGGGGACTGG TCTCGGCCTG TCGATGATCT ACGGTTTCGC CCGCCAGTCG
GAGGGACATG CCCGGATCGT GTCCGAGCCC GGCCGGGGGA CGACGGTGAC GATCTGCCTG
CCCCGCTACC GTGGGGCGCT GTCGTCCGAG CGCGCGTCGG CCTTGCCGCC TGAGCCAGCG
CGTTCGGAGC GGAACGAGAC GGTCCTCGTG GTCGAGGACG AGTTGGTGGT GCGCGACCTC
GTCGTGGAAG TGCTGCGCGA GCTCGGCTAC CGCGCGATCG AGGCACCGGA CGGGCCGTCC
GGCCTGGAGA TCGTGCGATC CTCCGCCCGG ATCGATCTTC TGGTCACCGA TGTCGGCCTG
CCCGGCCTCA ACGGGCGCCA ACTCGCAGAC CACGCCCGCA CCCTGCGGCC CGAACTGAGG
GTGCTGTTCA TGACGGGGTA CGCTGAGAAC GCGACGTTCG GTGGGGGCCC GCTCGATCCG
GACATGCAGA TGATCACCAA GCCGTTTTCG GTCGAACGGC TCGCCGCGCG CATCCGCGAG
ATGATGGAGC TTTCGTGA
 
Protein sequence
MTRMRNGEGV PASLRFLEEG GQTGREILAY PWSDTPLGPL EDWPVSLRTT LATMLACPAA 
MFLAWGPEGI SFFNDAYRPV FGDRLPRALG ARFREIWADL WEDIGPLVDA ALRGESVAQR
NLPLLMDRYG VPEESWWSFT YSPVRDDAGR INGMICVTAE TTAEVLAERA RRRSDERLEM
ALSAGGSIGI WDWDVAADRV TADPRFAALY GVDPEMAAAG APIAAFFSGV HPDDLPSLKA
SIGAVFGTGG QFDAEYRLVQ GDGTIRWVAA QGRCTLGEDG TPRHFPGVSF DITERKRIEQ
ALRDSQDRFR GIINSVDQMI WSTRPDGYHD FYNERWYAYT GVPAGTTDGE AWNGMFHPDD
RERAWAAWQH ALATGENYQI EYRLRHRSGL YRWVLGRAQP VRDPEGRIVR WFGTCTDIHD
RKLAEERQAF LLGLNDRLRE ADEPQAVTLA AAATLGAHIG VARAGYGEID ETGEIVRVER
DWTRDPSVPS LAGASRILDG FGPAVIAELR AGLTLVVEDC YADPRAGHDY AATWDSIGCR
SLVVVPLIRE GRLRAILYLH EPKPRVWRAE EIGLVEDVAQ RVGHAAERAR AEQAERANAR
ELRLIADSLP VLIALFDADG VCRFANAASA DWFGVAPAES VGQTLAALIG PADFAEARPR
FESARAGRDV RAERAWPRRD GSPRIADIRY LPRPMPDGST DGAYLFVTDI SDAKRIEAML
EREVGERTRE RDRLWQTTND LMGTAGLDGH LRSVNPAWGR LLGWSEQELL ERPFLDFIDP
EDHAGTGAVL ARLAGSDQIT DFVDRILSKD GRRRTVMWTA VPESGCFHIV GRDITDQRLA
EEQLRQAQKM EAVGQLTGGI AHDFNNLLTG IIGSLDLMQT RIAQGRIDTL ERYAGAALTS
AHRAASLTHR LLAFARRQPL EQKPVDVNVL LAGMEEMLRR ALPEQVHLDI VATEGLWPTL
CDPHQLENAV LNLAINARDA MPEGGRLVVE TSNAHLGPAD LRLHSGAREG AYVCIRVTDT
GHGMPPEVAA RAFEPFFTTK PLGMGTGLGL SMIYGFARQS EGHARIVSEP GRGTTVTICL
PRYRGALSSE RASALPPEPA RSERNETVLV VEDELVVRDL VVEVLRELGY RAIEAPDGPS
GLEIVRSSAR IDLLVTDVGL PGLNGRQLAD HARTLRPELR VLFMTGYAEN ATFGGGPLDP
DMQMITKPFS VERLAARIRE MMELS