| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0364 |
|---|
| Symbol | |
|---|
| ID | 7118664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 344542 |
|---|
| End bp | 347649 |
|---|
| Gene Length | 3108 bp |
|---|
| Protein Length | 1035 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643523164 |
|---|
| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
|---|
| Protein accession | YP_002419229 |
|---|
| Protein GI | 218528413 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.929522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG GCCCGATGTC CGCTCTGCGC TTTCAGGCCG CCTACGCCCC GGATGATGCC
GCTTTGGCGG AGGCATTGCT GCGTGAGGCG CCCCTGCCGG CGGCCACGGA GGCGGCGGTC
GATCGGCTGG CGTCCGACCT GATCGGCGCG ATCCGCGCGG ATGCCGGCCA CGGCGCCGTC
GAGGCACTGC TGCGGGAATA TGCGCTGACG ACCCGCGAGG GTCTCGCCCT CATGAGCCTC
GCCGAGGCAC TGCTGCGGGT GCCCGATGCG GCCACCGCCG ACCGGCTGAT CGCCGACAAG
CTGCGCGAGG GCGATTTTGC CCATCACGCG GTGCGTTCGG AGAGCGGCCT TGCCCATGCC
GCCTCCTGGG CGCTCGGCCT CGGCGCCCGC CTCGTCGGCC CGCAGGACAC GCCCGAGGCG
ACCTTGGGGA GCATGGTCCG CCGCCTCGGC CGCCCGGCCG TGCGCGCGGC GGCCCACCGG
GCGATGCGGG TGATGGGCGG GCAATTCGTG TTGGCCGAAG AGATCGGCGC GGCGCTCAAG
CGCGCCGGCT CGGGCACTGC CCGCCGTTCC CGCTTCTCCT TCGACATGCT CGGCGAGGGC
GCCCGCACGG CGGACGACGC CGAGAGCTAC CGCCAAGCCT ATGCCCGCGC CATCGCCCGG
ATCGGGCGGG AAGCCGGCAA CGCGCCGCTT CCGGCCCGGC CGGGCATCTC GGTGAAGCTG
TCGGCGCTGC ATCCGCGCTA CACCCCGACG CAAGGGGCGC GGGTGATGGC CGAGCTGGTG
CCGGTGGTGC GCGACCTCGC CCGCGACGCC CGCGCGCATG ACCTCAACTT CACCCTCGAC
GCCGAGGAGG CGGAGCGGCT CGAACTCTCC CTCGACGTGT TCGAGGCCGT GCTGGCCGAT
CCGGCTTTGG CCGGCTGGGA CGGATTCGGC CTCGCGATCC AGGCCTATTC GAAGCGCTGC
CTTCCCGTGA TCGACTACGT CGCGGGGCTC GCCGAGCGGC ACGACCGGCG GCTGATGGTG
CGCCTCGTCA AGGGCGCCTA CTGGGACACG GAGGTGAAGC TCGCCCAGAC GCAAGGGGCG
GCCGATTACC CCGTCTTCAC CCGCAAGGCG ATGACGGACC TGAACTATCT GGCCGCCGCC
CGGCGGCTGC TGGCGCTGCG CCCGCGCCTC TACCCGCAAT TCGCCACCCA CAACGCGCAG
ACCGTGGCGA GCGTGCTCGG TCTGGCCGGG CTGCTCGATC GTCCCGCGGA CGAGGAGGCC
GGGTTCGAGT TCCAGCGCCT GCACGGCATG GGCGAGGCGC TCTACCAGCG GCTTGCCGAG
CGGGCGCCGG GCGTCGGCCA GCGGGTCTAC GCCCCCGTCG GCGGCCACCG CGAGTTGCTC
GCCTATCTCG TCCGCCGGCT GCTGGAGAAC GGGGCGAACT CCTCGTTCGT CGCCCGCGCC
GCCGATCCCT CGGTGCCGGC GGCCGAACTG CTCGCCCGGC CTCAGGCCCT GGTGGAGACG
CCTTCGCAGG CCCGGCACCC CAAGATCCCG CTGCCGCGCG ACCTGTTCGG GCCTGAGCGC
CGCAATTCTC CGGGGCTCGC CTTCGGCGAT GGCGCGGCGC TGCGACGGTG GACCGATGCC
GTCGCGCGGG CCGCCGGCCC CGCCGACGCC GCGCCGATCA TCGACGGCGC CGTCCAGACC
GACCGCGCCC GCCCGGTGGT CAGCCCCATC GACGGCGCAG CCCTCGGAAG CGTCATCGAG
GCGGACCCCG TCACCGCCGC GCTCGCCATG GAGGCGGCCT CGCGCGGCTT CCCCGCCTGG
GCCGCGACCC CCGCCCGCGA GCGTGCCGCC TGCCTGGAAC GGGCGGCCGA CGCCTTCGTG
CGGGAGAAGG GCCGGCTGCT GCACCTGCTG CAAGCCGAGG CCGGCAAGAC CCTCGACGAC
GCCGTGGCGG AGTGGCGCGA GGCGATCGAC TTCCTGCGCT ACTACGCGGC GCAGGGCCGG
GATCTGTTCT GCGAACCGCA GGACCTGCCC GGCCCGGCGG GCGAGGCCAA CAGCCTGCGC
CTCGTCGGCC GGGGCGTGTT CGTCGCCGTC TCACCCTGGA ATTTCCCGCT CGCGATCTTC
ACGGGGCAGG TCGCCGCGGC GCTGATGGCC GGCAACGCCG TCGTCGCCAA GCCCGCGCCG
CAGACGCCGC TGGTAGCGGA CCTCGCCGTG CGCCTGCTCC ACGCGGCCGG CATTCCCGGC
AGCGCCCTTC ACCTCGTCCC CGGCGGACCG GAGACCGGCG CCGCGCTGAT CGAGCATCCG
GCCCTGTCCG GCGTGGTCTT CACTGGCTCG ACCACGACGG CGCAGCGGAT CAACCGGGCG
CTCGCCGCCC GCGACGGCGC GATCCTGCCG CTGATCGCCG AGACCGGCGG CATCAATGCG
ATGATCGTCG ATGCCACGGC GCTCCCCGAG CAGGTGGCCG ACGACGTGGT GGTCTCGGCC
TTCCGCTCCG CCGGCCAGCG CTGCTCGGCC CTGCGCCTGC TCCTCGTGCA GGAGGATGTC
GCCGACCGGA TGATCGCGGC CGTGGCCGGG GCGGGGCGGG AGCTGACGGT CGGCGACCCC
CGCGATCTGG CCACCGATCT CGGTCCGGTG ATCGACGCGG GCGCCAAGCA ACGGCTCGAC
GCGCATATCG CGGCCATGAC CGCCTCGGCG CGGCTGCACT ATGCCGGTGC GGCGCCGGGC
GGCCTCACCG TGGCGCCTCA TATCTTTGAA ATCGGCGGCG TCGCAGACCT GCGGGAGGAG
GTGTTCGGGC CCATCCTCCA TGTCGCCCGC TACCCGGCGG ATGGCCTCGG CTCGGTCCTC
GCGGCGATCC GGGCCGGCGG CTACGGGCTC ACCCTCGGCA TCCATTCGCG GATCGAGGAA
ACCGCCGAGC GCATCGCCGA GGCCCTGCCG CACGGCAACG TCTACGTGAA CCGCAACATG
ATCGGCGCCG TCGTCGGCAG CCAGCCCTTC GGCGGCTCCG GCCTATCGGG AACCGGCCCG
AAGGCCGGGG GTCCCCATTA TCTCGCCCGC TTCGCCACGG AGCGGACGCT CACCGTCAAC
ACCGCCGCGG CGGGCGGCAG CGTCGGCCTC ATCACCCTGG AGGGTTGA
|
|---|
| Protein sequence | MTDGPMSALR FQAAYAPDDA ALAEALLREA PLPAATEAAV DRLASDLIGA IRADAGHGAV
EALLREYALT TREGLALMSL AEALLRVPDA ATADRLIADK LREGDFAHHA VRSESGLAHA
ASWALGLGAR LVGPQDTPEA TLGSMVRRLG RPAVRAAAHR AMRVMGGQFV LAEEIGAALK
RAGSGTARRS RFSFDMLGEG ARTADDAESY RQAYARAIAR IGREAGNAPL PARPGISVKL
SALHPRYTPT QGARVMAELV PVVRDLARDA RAHDLNFTLD AEEAERLELS LDVFEAVLAD
PALAGWDGFG LAIQAYSKRC LPVIDYVAGL AERHDRRLMV RLVKGAYWDT EVKLAQTQGA
ADYPVFTRKA MTDLNYLAAA RRLLALRPRL YPQFATHNAQ TVASVLGLAG LLDRPADEEA
GFEFQRLHGM GEALYQRLAE RAPGVGQRVY APVGGHRELL AYLVRRLLEN GANSSFVARA
ADPSVPAAEL LARPQALVET PSQARHPKIP LPRDLFGPER RNSPGLAFGD GAALRRWTDA
VARAAGPADA APIIDGAVQT DRARPVVSPI DGAALGSVIE ADPVTAALAM EAASRGFPAW
AATPARERAA CLERAADAFV REKGRLLHLL QAEAGKTLDD AVAEWREAID FLRYYAAQGR
DLFCEPQDLP GPAGEANSLR LVGRGVFVAV SPWNFPLAIF TGQVAAALMA GNAVVAKPAP
QTPLVADLAV RLLHAAGIPG SALHLVPGGP ETGAALIEHP ALSGVVFTGS TTTAQRINRA
LAARDGAILP LIAETGGINA MIVDATALPE QVADDVVVSA FRSAGQRCSA LRLLLVQEDV
ADRMIAAVAG AGRELTVGDP RDLATDLGPV IDAGAKQRLD AHIAAMTASA RLHYAGAAPG
GLTVAPHIFE IGGVADLREE VFGPILHVAR YPADGLGSVL AAIRAGGYGL TLGIHSRIEE
TAERIAEALP HGNVYVNRNM IGAVVGSQPF GGSGLSGTGP KAGGPHYLAR FATERTLTVN
TAAAGGSVGL ITLEG
|
|---|
| |