| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0317 |
|---|
| Symbol | |
|---|
| ID | 7118615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 295697 |
|---|
| End bp | 296380 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643523115 |
|---|
| Product | nuclease (SNase domain protein) |
|---|
| Protein accession | YP_002419182 |
|---|
| Protein GI | 218528366 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.183306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.136686 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCCC GGTCCTGGCT TCTTGTCCTA CTTCTCGCCA CGCCAGCCCA CGCTGAGCCG
TTCGTTGGCC GAGCCTCAAT TGTCGATGGC GACACGCTCG ACGTTCGTGG AACGCGCATC
CGCCTTCACG GCATCGATGC GCCGGAAAGC GCCCAGCTCT GCAAGGACGC CGCTGGCAAG
GACTATCGCT GCGGACAGGC GGCCGCTCTG GCTCTCGCCG ATCACATCGG CAAACGCCTC
GTGACATGTG ATCCGCGCGA GACCGACCGC TACGGCCGAG TCGTCGCCGT CTGCCGTGCT
GACGCGGAGG ACCTGAACGC CTGGATGGTC GGGCAAGGGC ACGCCGTTGC GTACCGGCGC
TACACCGAGG ACTACGTCAA CACAGAACTC ACTGCGAAGG CGCTCCGACA CGGCATCTGG
GCGGGCACGT TCCAGGATCC ATCCGAGTGG CGGCGCGCAA AGCGTGTCGG CGGTGAACAC
TCGAGGCCTG AGACTGTCAC GCCGCCAAGC AAGGCGAGCG GCTGCAACAT CAAGGGCAAC
ATCTCAGCCG GCGGAGAGCG TATCTATCAC CTGCCCGGCT CGCGCGACTA CGAGCGCACC
CGCATCAACG ACCGCGCTGG CGAGCGCCTG TTCTGCTCGG AGGACGAGGC CAAGGCGGCC
GGCTGGCGGG CGACGCGAGG CTGA
|
|---|
| Protein sequence | MRSRSWLLVL LLATPAHAEP FVGRASIVDG DTLDVRGTRI RLHGIDAPES AQLCKDAAGK
DYRCGQAAAL ALADHIGKRL VTCDPRETDR YGRVVAVCRA DAEDLNAWMV GQGHAVAYRR
YTEDYVNTEL TAKALRHGIW AGTFQDPSEW RRAKRVGGEH SRPETVTPPS KASGCNIKGN
ISAGGERIYH LPGSRDYERT RINDRAGERL FCSEDEAKAA GWRATRG
|
|---|
| |