Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5758 |
Symbol | |
ID | 7112936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011738 |
Strand | + |
Start bp | 173993 |
End bp | 176440 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643484044 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_002381053 |
Protein GI | 218442733 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAC CGTCAATTTT ACCTACCCTG TTGTTTGCTA CTGGTGCGGT ACTGTCATTT TCTCAACCGG CGCAGGCACA GACCCTTATT CAAGTAACGG GTATTCAGTT AGAACCAACC CCAAATGGAT TAAAAGTAAT TGTAGAAACC GCACAAGGAA ACACACCTCA AGCTTTTATC ATTCCTTCTG GCGAAACGGT AGACATTCAA TTGCTTGATT CTCAATTAAA CTTGCCGGAC AAACAAAGTT TTCAGGTAGA AAATCCTGTT GATGGCATTG CCTCTGTCAC CGTAACCCAA GGCGAAGCGA ATACGGTTCA AGTAACCATC GTCGGGACAC AAGGATCGCC TCAAGTAGAA CTTGTTCCTA GCCCATTGGG AGTAGTATTG GATTTAAGAC CATCTTCAAC CACCGTCACT CCTGAAGAAC CCACCGAAGA AATAGACATC ATTGCTACAA CCGAAGCCAA TGAAAACGAC TACATTGTTG AAGATGCGAC AACTGCCACC TTTACCGATA CCCCTTTACG AGACATTCCT CAATCGATTC AAGTTATTCC AGAGCAAATC ATAGAAGATC AACAAGTAAT CCGACTCGAT GAAGCCTTGC GAAATGTGAG CGGCGTGGTT CAAGGTAATA CTTTTGGGGG AACACAAGAT GAATTTATCA TTCGGGGGTT TACCTCAACT TCTGGTAACC TTTTGTTAGA TGGATTTAGA CTTCCCAACT CGGGAACGAC CTTTAGAGAA ACTGCCACTT TAGAACGGAT TGAAGTTTTA AAAGGGCCGG CTGGGGTTTT ATTCGGGTTT GTTGAACCGG GTGGTGTGAT TAACTTAATT ACCAAGAAAC CCTTGCCAGA ACCTTATTAT GATGCTCAAC TTCAGATCGG AAGTTTTGCC TTTTTCCGTC CTACTTTTGA TTTGTCAGGG CCGTTGACTG AAGACAAAAG TTTACTCTAT CGATTAATGT TTGGTTATGA AACTGAAGAC GGTTTTCGGG AGTTTGATCA GGGAGTCAAT CGATTTTATA TTACTCCTGT AGTGTCTTGG AAACCCAGTG ATCAGACCGA GATTTTATTT GATTTGTCAT TTATCGATGA TGAGCGTCCT TTTGACCGGG GAATTATCAA TAATGTTAAT TTTAATATCC CTGAAGTTCC TGTCAATCGG ATTTTCGGCG AACCGGACGA TAAAAGTGAA GTTGAAGAAT TTAGTATTGG TTATCGATTA AACCATGAGT TTAATGAGAA TTGGGAAATA CAAAATAATT TTCGTTACAT TAGCTCTTTT AATTTTAATT ATCGGGCTGA ACCTCTTTAT GATGCTGATG AATTTGGCAA TCTTTCCCGT AACTTTCGCT CTAATGACGC TTATGAAGAA AATTTCAATC TTCAAACCCG TCTAATCGGA AAAGTAGCTA CAGGGCCAGT AGATCATACT CTTCTATTTG GATTTGACGC TTTCCGAGAA ACTTTTTGGC AACAGCAAAA CCGACTTCCT GTCGGGCTAA CTCCGAGTAT TAATTTATTT GATCCTCAAT ATAATGTTAT TCCTCGACCT TTTCTTTCTG AATTAACCAC CCGATTGTTC TTTTTTAGAA ACAGAACCGA CTATGTCGGG CTTTATCTTC AAGACCAAGT AACGATTACT GATAACCTCA AATTATTGCT TAATGGTCGG GTTGATATTG CCACTCAAGA GAACAAGTCT AGGGAAACTG GGGAAGAAAC AGTCAATGGA GATAGCGATT TTACCCCTAG AGTCGGAATT GTCTATCAAC CCATTGAACC AGTGTCTCTC TATGCCAGCT ATAGCGAGTC ATTTGTGCCT AATGGTAGCA CTAGAGCCGA TGGAACATTT TTACCTCCTG AAGAGGGTAG GCAATATGAA ATCGGCATTA GAACGGAACT CAACGAAGGG AGAGTTGTTC TCAATTTAGC CGCCTATGAT ATTACAAAAA GCAATGTAGC TACTGATGAC CCTTTAAATC CGGGCTTTTC TATTCCGACT GGGGAAATTA GAAGCCAGGG GATTGAATTT GATGTAATCG GGCGAATTTT GCCGGGTTGG AATATTATTG CTTCCTATGC CTATACCGAT GCTCGGATTA CAGAAGATAA TGATCCCGAA CGAGTCGGCT TGAGAGTGGG ATATGTTCCT TATAGTGCAG CTAGTTTATG GACAACCTAC ACCATTCAAT CCGGGAATTT AGAAGGATTA GGGTTTGGTG CTGGCTTTTT TTATATAGGC GATCGCATTG ATGGGTTTAT ACCGAGTGTT TTTCTGTCGA GTTATACTCG CGTCGATGCG GCGATTTATT ATCGACGAAA AAATTGGCAA GCGGAGGTGA ATTTTAAGAA TTTATTCAAT GACTATTATA TAGAATCCGG TTTTTATGAG CCGGGCGCTC CTTTTAATGT TATAGGTTCT TTTTCAATTC AGTTTTAG
|
Protein sequence | MKIPSILPTL LFATGAVLSF SQPAQAQTLI QVTGIQLEPT PNGLKVIVET AQGNTPQAFI IPSGETVDIQ LLDSQLNLPD KQSFQVENPV DGIASVTVTQ GEANTVQVTI VGTQGSPQVE LVPSPLGVVL DLRPSSTTVT PEEPTEEIDI IATTEANEND YIVEDATTAT FTDTPLRDIP QSIQVIPEQI IEDQQVIRLD EALRNVSGVV QGNTFGGTQD EFIIRGFTST SGNLLLDGFR LPNSGTTFRE TATLERIEVL KGPAGVLFGF VEPGGVINLI TKKPLPEPYY DAQLQIGSFA FFRPTFDLSG PLTEDKSLLY RLMFGYETED GFREFDQGVN RFYITPVVSW KPSDQTEILF DLSFIDDERP FDRGIINNVN FNIPEVPVNR IFGEPDDKSE VEEFSIGYRL NHEFNENWEI QNNFRYISSF NFNYRAEPLY DADEFGNLSR NFRSNDAYEE NFNLQTRLIG KVATGPVDHT LLFGFDAFRE TFWQQQNRLP VGLTPSINLF DPQYNVIPRP FLSELTTRLF FFRNRTDYVG LYLQDQVTIT DNLKLLLNGR VDIATQENKS RETGEETVNG DSDFTPRVGI VYQPIEPVSL YASYSESFVP NGSTRADGTF LPPEEGRQYE IGIRTELNEG RVVLNLAAYD ITKSNVATDD PLNPGFSIPT GEIRSQGIEF DVIGRILPGW NIIASYAYTD ARITEDNDPE RVGLRVGYVP YSAASLWTTY TIQSGNLEGL GFGAGFFYIG DRIDGFIPSV FLSSYTRVDA AIYYRRKNWQ AEVNFKNLFN DYYIESGFYE PGAPFNVIGS FSIQF
|
| |