Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5478 |
Symbol | |
ID | 7112693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011737 |
Strand | + |
Start bp | 131804 |
End bp | 133543 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643483859 |
Product | surface antigen (D15) |
Protein accession | YP_002380868 |
Protein GI | 218442547 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.492721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTGTT CCAAATATGA ATGGTTGACA ATTGGCGAAA GTTTATGTGT GTGTCTGCTA TCAGTTAATT GGGCTTTAGC TCAACAAGCA AGCCCGCAAA TGGCTCAAGC TGACTTGCTA GTGCCGGTGT CGAAAGCAGA AATAGTTCCT TTCCTCTCAG ATTTTAAAAT AGAAACAGTT CCTTTGCCTC AAGAACCTAT TTTAGAAATA GTTCCTTTAT CTTCAGAGTC TATCTTAGAA ACAGTTTCCT TGTTCCCTCC AGGTGTTACT TTACAAACAG TTCTTGTGAA AAACTCTACC GTAATATCTC TTGAAGAAGT TGCTCAGATT GCTCAATTCT ATCAAGGTAA AAATATAACG TTCGGGGACG CTTTACAAAT ACAACAGAAA CTTAATAATC TTTATCGAGA CAAAGGATAT ATCAACTCAA GAGTTAACTT CGCCTGGGAA GATAATGAAG AACTTGAAGC GGGAAAAGGA ATTTTAGTTT TCCGAGCCGA AGAAGGAAGT TTACAAACTT TACATATTCA GGGATTATCT AATATCAAAG AAAGTTACAT TCGGGAGCGT TTGCTGCCTT ACGCTTCAAC TCCTTTAAAT ATAAAGAAAC TCGAAGAAGG ATTATTATTA CTACGAGAAA ATCGACTTAT AAAAGGAATA AATTCTCAAC TAATTCGTAG TGACAATCAA ACGGAAAGTA TTTGGGTAGT ACAGATTGAT GAAGCTCCCT CTTGGCAAGT TGCCGTAGGA ACTAATAACG AAGAAAGCCC ACTTGTGGGA GATTGGGGCT GGCAAATTCA AGCCGAAAAT CGCAATTTAT TTGGAGGCGG AGAAGTGGCG AGGGCGGAGA TCAATGGAAC AGAAGGACTA ACACGGGGTG CATTTTCTGT AAATCTGCCT GTCAATTCTC AAGATAGTTT TTTGGGCTTA AATTATCAAT TTGTCGAGAG CGAAGTAGTA GCAGAGCCTT TTAACGATTT AGGGATTGTC AATAATTCTT TCTCGGTTTC GGCTACTTAT CAGCAATTTA TAACTCGTAC CCCAACGAAT AATCTAGTGA TGGGTTTCGA CTTAAATTAT GAACAACTTC AAACTAAGAT TTTCAATGAT TTTCCCTTTT CATTCCAAAC AAATGTCCGA AATGGGTTTA CAGAGTTAGT GGTGGCAAGA TTTTTTCAAA ATTACCAAAT TCGAGATAAT GATGATGTTG TTTGGTTTAG TTCACAGTTC AATTATGGTT GGACAAATTT GATCGATGAG TCAAATTTCT TGAGTTGGGT ATTGCAAATC CAACACCTTC ACGTTTTTAG CGATCGGACT CGGTTAATAT CTCGCCTTTT CACCCAATTA ACAGGAGATA ATTTGCCCTC ATTGGAGCAG TGTGCTATTG GCGGAATCAA CGGGAATCAA AACATTAATG GAAATCCTGT TAGGGGTTAT GCAACTAATG TTCGTTTTGG GGATAACTGT TTCACCGCTT CAGTTGAACT TTGGTTTGAT TTATTTAAAA ATAAAAGTTT CGGAACTGTT AGCCTTGTTC CTTTTGCTGA TTTTGGGACA CTTGGAAATA ATAATGAAGG CAGTTCAAGC GATGATACTT TAATTAGTAT TGGATTAGGG TTACGCTGGG AAATAAGTGA CTCTATATTC TTGCGTCTAG ATTATGGAAT TCCACTCAAC AGGCTTCCAC AATCCTTTGA AGAACAAAGA TGGAATGTAA ATTTACTATG GATTCGTTGA
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Protein sequence | MICSKYEWLT IGESLCVCLL SVNWALAQQA SPQMAQADLL VPVSKAEIVP FLSDFKIETV PLPQEPILEI VPLSSESILE TVSLFPPGVT LQTVLVKNST VISLEEVAQI AQFYQGKNIT FGDALQIQQK LNNLYRDKGY INSRVNFAWE DNEELEAGKG ILVFRAEEGS LQTLHIQGLS NIKESYIRER LLPYASTPLN IKKLEEGLLL LRENRLIKGI NSQLIRSDNQ TESIWVVQID EAPSWQVAVG TNNEESPLVG DWGWQIQAEN RNLFGGGEVA RAEINGTEGL TRGAFSVNLP VNSQDSFLGL NYQFVESEVV AEPFNDLGIV NNSFSVSATY QQFITRTPTN NLVMGFDLNY EQLQTKIFND FPFSFQTNVR NGFTELVVAR FFQNYQIRDN DDVVWFSSQF NYGWTNLIDE SNFLSWVLQI QHLHVFSDRT RLISRLFTQL TGDNLPSLEQ CAIGGINGNQ NINGNPVRGY ATNVRFGDNC FTASVELWFD LFKNKSFGTV SLVPFADFGT LGNNNEGSSS DDTLISIGLG LRWEISDSIF LRLDYGIPLN RLPQSFEEQR WNVNLLWIR
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