Gene PCC7424_5478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5478 
Symbol 
ID7112693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011737 
Strand
Start bp131804 
End bp133543 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content37% 
IMG OID643483859 
Productsurface antigen (D15) 
Protein accessionYP_002380868 
Protein GI218442547 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2831] Hemolysin activation/secretion protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.492721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGTT CCAAATATGA ATGGTTGACA ATTGGCGAAA GTTTATGTGT GTGTCTGCTA 
TCAGTTAATT GGGCTTTAGC TCAACAAGCA AGCCCGCAAA TGGCTCAAGC TGACTTGCTA
GTGCCGGTGT CGAAAGCAGA AATAGTTCCT TTCCTCTCAG ATTTTAAAAT AGAAACAGTT
CCTTTGCCTC AAGAACCTAT TTTAGAAATA GTTCCTTTAT CTTCAGAGTC TATCTTAGAA
ACAGTTTCCT TGTTCCCTCC AGGTGTTACT TTACAAACAG TTCTTGTGAA AAACTCTACC
GTAATATCTC TTGAAGAAGT TGCTCAGATT GCTCAATTCT ATCAAGGTAA AAATATAACG
TTCGGGGACG CTTTACAAAT ACAACAGAAA CTTAATAATC TTTATCGAGA CAAAGGATAT
ATCAACTCAA GAGTTAACTT CGCCTGGGAA GATAATGAAG AACTTGAAGC GGGAAAAGGA
ATTTTAGTTT TCCGAGCCGA AGAAGGAAGT TTACAAACTT TACATATTCA GGGATTATCT
AATATCAAAG AAAGTTACAT TCGGGAGCGT TTGCTGCCTT ACGCTTCAAC TCCTTTAAAT
ATAAAGAAAC TCGAAGAAGG ATTATTATTA CTACGAGAAA ATCGACTTAT AAAAGGAATA
AATTCTCAAC TAATTCGTAG TGACAATCAA ACGGAAAGTA TTTGGGTAGT ACAGATTGAT
GAAGCTCCCT CTTGGCAAGT TGCCGTAGGA ACTAATAACG AAGAAAGCCC ACTTGTGGGA
GATTGGGGCT GGCAAATTCA AGCCGAAAAT CGCAATTTAT TTGGAGGCGG AGAAGTGGCG
AGGGCGGAGA TCAATGGAAC AGAAGGACTA ACACGGGGTG CATTTTCTGT AAATCTGCCT
GTCAATTCTC AAGATAGTTT TTTGGGCTTA AATTATCAAT TTGTCGAGAG CGAAGTAGTA
GCAGAGCCTT TTAACGATTT AGGGATTGTC AATAATTCTT TCTCGGTTTC GGCTACTTAT
CAGCAATTTA TAACTCGTAC CCCAACGAAT AATCTAGTGA TGGGTTTCGA CTTAAATTAT
GAACAACTTC AAACTAAGAT TTTCAATGAT TTTCCCTTTT CATTCCAAAC AAATGTCCGA
AATGGGTTTA CAGAGTTAGT GGTGGCAAGA TTTTTTCAAA ATTACCAAAT TCGAGATAAT
GATGATGTTG TTTGGTTTAG TTCACAGTTC AATTATGGTT GGACAAATTT GATCGATGAG
TCAAATTTCT TGAGTTGGGT ATTGCAAATC CAACACCTTC ACGTTTTTAG CGATCGGACT
CGGTTAATAT CTCGCCTTTT CACCCAATTA ACAGGAGATA ATTTGCCCTC ATTGGAGCAG
TGTGCTATTG GCGGAATCAA CGGGAATCAA AACATTAATG GAAATCCTGT TAGGGGTTAT
GCAACTAATG TTCGTTTTGG GGATAACTGT TTCACCGCTT CAGTTGAACT TTGGTTTGAT
TTATTTAAAA ATAAAAGTTT CGGAACTGTT AGCCTTGTTC CTTTTGCTGA TTTTGGGACA
CTTGGAAATA ATAATGAAGG CAGTTCAAGC GATGATACTT TAATTAGTAT TGGATTAGGG
TTACGCTGGG AAATAAGTGA CTCTATATTC TTGCGTCTAG ATTATGGAAT TCCACTCAAC
AGGCTTCCAC AATCCTTTGA AGAACAAAGA TGGAATGTAA ATTTACTATG GATTCGTTGA
 
Protein sequence
MICSKYEWLT IGESLCVCLL SVNWALAQQA SPQMAQADLL VPVSKAEIVP FLSDFKIETV 
PLPQEPILEI VPLSSESILE TVSLFPPGVT LQTVLVKNST VISLEEVAQI AQFYQGKNIT
FGDALQIQQK LNNLYRDKGY INSRVNFAWE DNEELEAGKG ILVFRAEEGS LQTLHIQGLS
NIKESYIRER LLPYASTPLN IKKLEEGLLL LRENRLIKGI NSQLIRSDNQ TESIWVVQID
EAPSWQVAVG TNNEESPLVG DWGWQIQAEN RNLFGGGEVA RAEINGTEGL TRGAFSVNLP
VNSQDSFLGL NYQFVESEVV AEPFNDLGIV NNSFSVSATY QQFITRTPTN NLVMGFDLNY
EQLQTKIFND FPFSFQTNVR NGFTELVVAR FFQNYQIRDN DDVVWFSSQF NYGWTNLIDE
SNFLSWVLQI QHLHVFSDRT RLISRLFTQL TGDNLPSLEQ CAIGGINGNQ NINGNPVRGY
ATNVRFGDNC FTASVELWFD LFKNKSFGTV SLVPFADFGT LGNNNEGSSS DDTLISIGLG
LRWEISDSIF LRLDYGIPLN RLPQSFEEQR WNVNLLWIR