| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5292 |
|---|
| Symbol | |
|---|
| ID | 7111180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 5870662 |
|---|
| End bp | 5871645 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643483499 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_002380508 |
|---|
| Protein GI | 218442179 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCTG AGGTTAAGCA GAATCCCTAT TTATTAGTTG TTATCGTCAA CTACCGAACC
CCGAAACTGA CGATAGATTG TTTGCATTCT CTGGTTGAAG AAATTAAAAT TTTACCCAAC
ACCAAGGTAG TTGTAGTAGA TAACTATTCC GGTGATAACT CAGCCGAACA AATCAGGGCA
GAAATTAACA CCCAACAATG GCAAGATTGG GTTTCTTTCA TCGCTGCCGA ACGCAATGGA
GGTTATGCCT ATGGCAATAA TCTCGGTATT CGTCCGGCTC TGGAGTCAGA TAACAAACCC
GATTACGTTC TCCTTCTTAA TCCAGATACA GTAGTACGTC CAAAAGCCCT AAAAGTTTTA
GTGGATTTTA TGGAAGCTCA TCCTCAAGTA GGCATTGCCG GCAGTCGCTT AGAAGATCCT
GATGGAACTC CTCAACATTC GGCTTTTCGC TTCCATAGCA TTTGGAGTGA ATTAGATTGT
GCTTTACGCT TTGGGCCGAT TTCAAAATTA CTTCAGTCTA AAATTATAGC CCCTCCGGTC
TCCGATGTGA CTTGTCAAAC TGACTGGGTA GCCGGAGCAA GTATGATCAT CCGCCGAGAA
GTCTTTGACT CAGTCTCGTT ATTGGATGAA GAATATTTTA TGTATTATGA AGAAGTAGAC
TTTTGTCTCC AGGCTAATCG AGCCGGATGG AGTTGTTGGT ATGTTCCTGA AAGCCGGGTA
GTTCATCTAG TCGGACAAAG TTCTGGAGTC ACCGTTACCA AAGTTCGTCC TAAGCGCCGT
CCTAAATACT GGTTTGATTC TCGAAAACGC TTTTTTATCA AAAACTATGG GTTTATCTAT
GCTGTATTAG CAGATTTATT CTGGATGACA GGGTTTTCTT TGTGGACAAT TCGCCGAAGT
ATTCAAAATA AAATTGATAA CGATCCTCCT TATTTACTTC AAGATTTCTT TTCAAATAGT
GTAATTTTTA AATTTACCAA TTAG
|
|---|
| Protein sequence | MLSEVKQNPY LLVVIVNYRT PKLTIDCLHS LVEEIKILPN TKVVVVDNYS GDNSAEQIRA
EINTQQWQDW VSFIAAERNG GYAYGNNLGI RPALESDNKP DYVLLLNPDT VVRPKALKVL
VDFMEAHPQV GIAGSRLEDP DGTPQHSAFR FHSIWSELDC ALRFGPISKL LQSKIIAPPV
SDVTCQTDWV AGASMIIRRE VFDSVSLLDE EYFMYYEEVD FCLQANRAGW SCWYVPESRV
VHLVGQSSGV TVTKVRPKRR PKYWFDSRKR FFIKNYGFIY AVLADLFWMT GFSLWTIRRS
IQNKIDNDPP YLLQDFFSNS VIFKFTN
|
|---|
| |