Gene PCC7424_5273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5273 
SymbolrecF 
ID7109686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5844840 
End bp5845994 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content38% 
IMG OID643483480 
Productrecombination protein F 
Protein accessionYP_002380489 
Protein GI218442160 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0402761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTAA AAACTGTACA ACTTCGCTCT TTTCGGAATT ATCGAGAGCA ACAGGTTAAT 
TTTGAATCCC AAAAAACCAT TATTGTCGGA AATAATGCCC AAGGAAAATC TAACTTACTC
GAAGCGGTAG AACTTTTGGC AACCTTAAAA AGTCATCGAG TCAGTCGAGA TCGAGATTTA
GTCTTAGAAG GGGCAACCAC AGGGCAAATT TTAGCCACTT TAGAACGGGC TTATGGGTTA
GCTGAATTGG GGTTAATTTT GCGGGTTTCA GGAAGAAGAA CAGTTATCTT AAATCAAGAA
CCCCTCCGCC GTCAACTTGA TTTTTTAGGT GTTTTGAATG CGGTACAATT TTCGAGTTTA
GATCTCGATT TAGTCAGAGG TTCACCGGAA TCTAGACGCA GTTGGATAGA TACCCTTTTG
GTACAACTAG AACCGATTTA TGCTCATATT TTATCCCAAT ATTATCAAGT TTTAAAACAA
AGAAACGCTC TTTTAAAAAA AATTCGTCAA CAAGAAGAAG ACAGTCAAAA TCCTTCCCTA
AGTTCGGAGC AATTGTCTAA TGATATTTCT CAATTAAAAC TGTGGGATAG CCAATTAGCT
GAAACCGGTT CTAGAGTTAC TCGAAGACGG GCGAGAGTTT TAGAGAGATT AACCCCTTTA
GCTCAAAAAT GGCACGCTAA TATTAGCGGG AAAACCGAAC AGTTAGAGAT TCAATATATG
CCTAATGTTA ATTGGACAGA AGATGAACCG ATGCAAGTGC AACAAGCTTT TTTAGAAAAA
ATCGAAAAAC GTCGCATAGC AGAACAACAA TTAGGAACGA CGGTAGTAGG CCCTCATCGG
GATGAAATCG AATTTATTAT TAATCAGACA CCGGCCAAAT ATTATGGCTC TCAAGGACAA
CAAAGAACCC TAGTTTTAGC GTTAAAGTTA GCAGAATTAC ATCTAATTGA AGAGGTAGTA
GGAGAACCTC CTTTATTACT TTTAGATGAT GTGTTAGCGG AGTTAGATCC TCATCGTCAA
AATCAATTAC TGGATGCGAT TGAAGATCGA TTTCAAACTC TCATTACTAC CACTCATCTT
AATTCTTTTG AGACTAAATG GCTTAAGTCT TCTCAAATTT TATCGATAGA TGGGGGACAA
ATTAGGGATT TTTAA
 
Protein sequence
MYLKTVQLRS FRNYREQQVN FESQKTIIVG NNAQGKSNLL EAVELLATLK SHRVSRDRDL 
VLEGATTGQI LATLERAYGL AELGLILRVS GRRTVILNQE PLRRQLDFLG VLNAVQFSSL
DLDLVRGSPE SRRSWIDTLL VQLEPIYAHI LSQYYQVLKQ RNALLKKIRQ QEEDSQNPSL
SSEQLSNDIS QLKLWDSQLA ETGSRVTRRR ARVLERLTPL AQKWHANISG KTEQLEIQYM
PNVNWTEDEP MQVQQAFLEK IEKRRIAEQQ LGTTVVGPHR DEIEFIINQT PAKYYGSQGQ
QRTLVLALKL AELHLIEEVV GEPPLLLLDD VLAELDPHRQ NQLLDAIEDR FQTLITTTHL
NSFETKWLKS SQILSIDGGQ IRDF