| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5234 |
|---|
| Symbol | |
|---|
| ID | 7109566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 5808224 |
|---|
| End bp | 5812009 |
|---|
| Gene Length | 3786 bp |
|---|
| Protein Length | 1261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643483441 |
|---|
| Product | cobaltochelatase, CobN subunit |
|---|
| Protein accession | YP_002380450 |
|---|
| Protein GI | 218442121 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
|---|
| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.34386 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGGA GGACGACGAC ACCAGGAGGA TGGAATGCTA CTACAGAGGG AGTGATTTTT
GTTGAGCAAA CCCCCGCATC AATTATAATT CTCACGGTAG CAGATACAGA AATTCAAACA
ATCGGGACGG CGGTTACCCA TCTTCCTGAT GAGTTTCCCT CACTACGAGT CGTTAACTTA
TTACAGCTAC AGCAGCAATT AAGTATAGAT CATTATGCCG AACAGATTTT ATCCCAAGCT
CAAGTTATTA TTATCAGACT ATTAGGAGGA AGGTCTTACT GGCCCTATGG GTTAGAGGTG
ATTGAAGAAA TAGCTCAAAC CAAACAGACA ACTATTTTTA TTTTGCCAGG AGATGACCGT
CCCGATCCAG ATTTAATGAC TCATTCTACG GTATCTTTAA GGGATGTTAA TCGCTTATGG
CGTTATCTAA CCGAAGGCGG TATCGAAAAT TGGGTTAATG CTTTAAAATT TGTCGCTGAT
ATTGGGTTAG GAACAGCTTA TAATCCTGCG CCTCCTCAAC TTGTCCCCAA AGTAGGACTC
TATGACTACC CAACATCAAC TCATTCTAAC CCTTCTCTTC AACTGGGTTA TAAAGTCGGA
CTATTATTTT ACCGTGCCCA TTATTTATCA GGAAATACGT TAGCGATCGA TGCCCTGTGT
CATGCTTTAA TAGAACGAAA CTTAGAACCC GTTCCCCTAT TTGTCTCATC GTTACGAGAT
GGAGAAATTC AAGAAACCCT TTTATCGTGG TTTGCTCCTC CAGAGTCCGA ACCCATACAA
ATTTTACTCA ATACCACCAG TTTTTCAATA GCACAAATAG ACTCAATAGA CCGAGAATTT
AAGGAAAATT TAACGCCCAG CGAGTTAAGT TTTTGGGAAA AATTACAAGT ACCTGTTTTA
CAAGTTATTT TCAGTGGAGG AACACTCGAA GAATGGGAAA CATCTTTTGC CGGATTAACA
CCGACAGATG TGGCCATGAA TGTAGCCTTA CCGGAAGTAG ACGGAAGAAT TATTACCAGG
GCAGTCTCTT TTAAATCCGT TAAAACTTGG AATCCGATTA TAGAAACAGA TGTAGTTATC
TATCAACCGA AAAAAGATCG CATAAATTTT GTCGCTGACC TAGCCCTGAA TTGGATAGGG
TTAAAACAGA CCCCCAAACC GGAGAGAAAA ATCGCCTTAA TTTTAGCCAA CTATCCTAAC
CGAGATGGAA GACTAGGAAA CGGAGTCGGA TTAGACACCC CTACCAGTTG TATAGAGATT
CTCAACGCCT TAAAAAAAGA CGGTTATCGA GTCGAAAACA GTCCTCAAAG CGGAGATGAA
TTAATTCGAC GATTAACCCA AGGAGTTACC AATGATCCAG AAGCAAAAGA CTTGAGAAAC
ATCTATCAAC AGCTTGACCT AAAAGACTAT CAAAACTACT TTAGTACCCT ACCCGAAAAA
GTCCAACAAG AGATAAACCG TCGATGGTCA GAAGTGGGAG AAGAAACAAG TCAAACTATT
CCTATTCCGG GACTTCAATT AGGCAATATC TTTATCGGAA TTCAACCCTC AAGGGGATAC
GATCGAGATC CGAGTTTAAA TTATCATGCC CCCGACTTAG AACCCACACC TGACTATCTG
GCTTATTACT ACTGGTTAAA AGAAAAATTT GGCGCAAAAG CGATCGTCCA TATCGGTAAA
CATGGAAACT TAGAATGGCT ACCCGGAAAA AGTCTAGCCC TTGCTAACAC TTGTTATCCC
GAAATAGCCC TAGGAACGCT CCCCCATTTT TATCCCTTTA TCGTTAACGA TCCGGGAGAA
GGCTCACAAG CTAAAAGACG TTCCCATGCC GTCATCATAG ATCATCTCAC CCCTCCTTTA
ACTCGTGCCG AACTGTATGG AGACTTAGAA AAACTAGAAA CCCTCATAGA CGAATATTAT
GAAGCACAAA ACTTAGACCC CGGACGACTA AAAATAATCG AAACCCACAT CAACAAACTC
ATCAAAGAAA CTCATCTCAA TCAAGACTTA GGAATAGACC AACCCGATAA CACCTCAATC
ACCCAATTTC TCACCCAAGC GGATAAATAT TTATGTGACC TAAAAGAAGC CCAAATAAGA
GACGGATTAC ATATCTTTGG ACAAACACCC CCAAGAAAAC AACTGATCAA TCTCATCATA
GCCATAACCC GATCGCCCAG CTATAATCGC CTCGGACTGA TAGAAGCGAT CGCCCAAGAT
CTACAGATAA ATCTTAACTC TCCCCCTCAC AAAAACCTCT CCCTTCCCTC CTCAGTGCCT
CTGTGCCTCT GCGAGAAATT AAAACAAAAC CGTAGCGAAG GAGACACCCT AGAAACCTTA
GAAACTTATG CTTACCAACT CATAGAAACC CTAATCAACC ATAATAGTAT TCCCGACGAT
CACCCCAAAA CCACCCAACA GCTAAACTGG ATCAAAACCC ATTTACTTCC TGCCCTAGAA
AACACCCCTC AAGAAATCAC CCACCTCTTA AAAGGACTCG ATGGAGGGTA TATTCCTCCC
GGAGCATCAG GAGCGCCCAC CAGAGGACGA CCGGAAGTTC TCCCCACAGG ACGAAACTTT
TATTCTGTAG ACATTCGTGC CATTCCCACC CCAATTGCTT GGGACGTAGG CAGAAAAGCC
GCCGAAACCT TAATCGAAAG ATACACCCAA GATAACGGAG AATACCCTCA AACCCTCGCC
ATTTCGGTGT GGGGAACATC CACCATGAGA ACCGGCGGAG ATGATGTTGC ACAAATTCTC
GCTTTACTCG GCGTTCAACC GATTTGGGAT ACTGCTTCTC GAAGAGTAGT AGATTATGAA
ATTCTTACCC CGTCTGCGTT AGGACGACCT CGCGTCGATG TCACGGTGCG GGTTTCAGGC
TTTTTTAGGG ACAGCTTTCC TAACATACTA CAGCTACTGT ACCATGTGAT AAAAGATGTG
TCAAGCCTAA AAGAAGAAAA AGAAATCAAT CCTTTAGCAG CGCAAGTGGA TATAGAGAGG
GAGTTTTGGG AAAATCAAGG ATTAACAAAA GATCAAGCAA AGCAAAGATC GTTGTATAGA
ATATTTGGGT CTAAACCAGG GGCATATGGT GCTGGATTAC AGGGATTAAT TGAGGCACAA
AATTGGCAAA GTGATGAAGA TTTAGGGAGG GCATATATTA ACTGGAGTTG TTATGGATAT
GATCATCAAG GAATAGGTCA TGGAGTGCCC GAAGTTTTTC AACAAAGACT GAAAAAATTA
CAAGTGATTC TCCACAATCA AGATAACCGG GAACATGACT TATTAGACTC CGATGATTAT
TATCAATTCC AAGGAGGATT AACCGCAGCC GTAAGGGCAA TAACGGGGAA AAATCCTCAG
ACTTATTTTG GAGATAATTC GCGCCCTCAT GATCCGAAGG TGAGGTTATT AAAAGAAGAA
ATTGCCAGAG TCTATCGATC GCGGGTGGTG AATCCGAAAT GGATAGAAGG AGTGATGCGG
CATGGATATA AAGGAGCGTT TGAGATGGGG GCGACCGTAG ATTATCTGTT TGCGTATGAT
GCAACAGCAA GATGTGTGGA AGATTTTATG TATGAGGGAG TTGCCCAAGC CTATTTGTTA
GACGAAAAAG TACAGCAATT CATTGAAGAA AAAAATCCTT GGGTATTGCG GGATATGGCA
GAGAGATTAT TAGAAGCTCA TCAAAGGGGA TTATGGGAGT CGGCGAGTGA GGAACTCATA
GAGAAGTTGA GGGCAATTGT CCATCACGGG GAGGGAGTCA TCGAAGAGAT AATTGATAAT
GGATAA
|
|---|
| Protein sequence | MHRRTTTPGG WNATTEGVIF VEQTPASIII LTVADTEIQT IGTAVTHLPD EFPSLRVVNL
LQLQQQLSID HYAEQILSQA QVIIIRLLGG RSYWPYGLEV IEEIAQTKQT TIFILPGDDR
PDPDLMTHST VSLRDVNRLW RYLTEGGIEN WVNALKFVAD IGLGTAYNPA PPQLVPKVGL
YDYPTSTHSN PSLQLGYKVG LLFYRAHYLS GNTLAIDALC HALIERNLEP VPLFVSSLRD
GEIQETLLSW FAPPESEPIQ ILLNTTSFSI AQIDSIDREF KENLTPSELS FWEKLQVPVL
QVIFSGGTLE EWETSFAGLT PTDVAMNVAL PEVDGRIITR AVSFKSVKTW NPIIETDVVI
YQPKKDRINF VADLALNWIG LKQTPKPERK IALILANYPN RDGRLGNGVG LDTPTSCIEI
LNALKKDGYR VENSPQSGDE LIRRLTQGVT NDPEAKDLRN IYQQLDLKDY QNYFSTLPEK
VQQEINRRWS EVGEETSQTI PIPGLQLGNI FIGIQPSRGY DRDPSLNYHA PDLEPTPDYL
AYYYWLKEKF GAKAIVHIGK HGNLEWLPGK SLALANTCYP EIALGTLPHF YPFIVNDPGE
GSQAKRRSHA VIIDHLTPPL TRAELYGDLE KLETLIDEYY EAQNLDPGRL KIIETHINKL
IKETHLNQDL GIDQPDNTSI TQFLTQADKY LCDLKEAQIR DGLHIFGQTP PRKQLINLII
AITRSPSYNR LGLIEAIAQD LQINLNSPPH KNLSLPSSVP LCLCEKLKQN RSEGDTLETL
ETYAYQLIET LINHNSIPDD HPKTTQQLNW IKTHLLPALE NTPQEITHLL KGLDGGYIPP
GASGAPTRGR PEVLPTGRNF YSVDIRAIPT PIAWDVGRKA AETLIERYTQ DNGEYPQTLA
ISVWGTSTMR TGGDDVAQIL ALLGVQPIWD TASRRVVDYE ILTPSALGRP RVDVTVRVSG
FFRDSFPNIL QLLYHVIKDV SSLKEEKEIN PLAAQVDIER EFWENQGLTK DQAKQRSLYR
IFGSKPGAYG AGLQGLIEAQ NWQSDEDLGR AYINWSCYGY DHQGIGHGVP EVFQQRLKKL
QVILHNQDNR EHDLLDSDDY YQFQGGLTAA VRAITGKNPQ TYFGDNSRPH DPKVRLLKEE
IARVYRSRVV NPKWIEGVMR HGYKGAFEMG ATVDYLFAYD ATARCVEDFM YEGVAQAYLL
DEKVQQFIEE KNPWVLRDMA ERLLEAHQRG LWESASEELI EKLRAIVHHG EGVIEEIIDN
G
|
|---|
| |