Gene PCC7424_5170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5170 
Symbol 
ID7109502 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand- 
Start bp5739844 
End bp5740994 
Gene Length1151 bp 
Protein Length383 aa 
Translation table11 
GC content31% 
IMG OID643483379 
Producthypothetical protein 
Protein accessionYP_002380388 
Protein GI218442059 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00188868 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTC ACCTTGATAG CTTGCTTCAT CTTCCCTTTG TAACTGTATT AACTTGTCAA 
CAACAAGAAG GATTTATTCT ATTAACATTA GATTTTATAA ACGAAGGAAT TTCTTGTCCT 
CATTGCCAAA CATATACAGA TAATCTTCAT CAAATCCGCC CTATTTTAGT TAGAGATTTA 
TCAATTTTAG GTCAAGGAGT TTACCTGAAA GTTCCACGTC GCCAATTTAT CTGCTCCCAA 
TGCGGTAAAT ATCCAACTGA AATTTTAAAT TTTATAGACA GGCGAAGAAA CTATACTAAA 
CGTTATGAAG AGCATATTTA TGAAAAAGTC AAAGAACTCA CTGTAGAGCA AGTCAGTAAA 
AATGAACAAT TAAGTCCTGA ACAAGTACAA AATATTTTTC AAAGAATAGC TAAACAAAAA 
AAAAAGACTG GGGAAAACCA GAAAGATTAG GATTAGATGA ATTTAGCCGT CAAAAAGGGC 
AAGGCAATTT GGTTACCGTA CTCAGTAATC TAGATGAAGG CTCACTATTA GAAGTTATAG 
ATTCCCATAA AAGTGAAGAG ATTATAGAAG TCCTAAAACA AGCTCCAATT TCAATTAGAG 
AAAATATTAA AGAGGTTTGT GTCGATATGT GGGGAGGATT TAAAAAAGTT ATTACTGAGG 
TTTTTCCTAA TGCTCTAGTC GTAATTGATA GGTTTCATGT CATGAAGTTA GTTCATAAAG 
CCTTAAATCA CTTGCGACTT AAATTAAAGT TAAAAGGCTT AAAAAACCGC TATTTATTAC 
TTAAGAATAA GGTCAATTTA ACTGAAGAAG AAAAAAAAGA CTTAGGAGAG CTATTAAGAG 
GCTATCCTTG TTTGAGTATT GCTTATGAAT TGAAAGAAGA ACTGAGAAAT ATATATGAAA 
ACACAAGAAC GGTAAAAGAA GGTTTAAAAA AACTCAAAAA ATGGTTAAGA TTAGCCAGAG 
TTTTTTTCGG AAAAACGGCT GAGACTTTAG AACTTCATCT TCAGAATATT TGTAATTATT 
TTCTTAATCG AACAAGCAAT GGAGTAATGG AAGGATTAAA CAATAAAATT AAGTTAATTC 
TTCGTCAAAG TTATGGATTT AGCAATTTTA AATTCATGAG AGAAAAATTA TTAGCTTGTT 
TATTTAAATA A
 
Protein sequence
MDFHLDSLLH LPFVTVLTCQ QQEGFILLTL DFINEGISCP HCQTYTDNLH QIRPILVRDL 
SILGQGVYLK VPRRQFICSQ CGKYPTEILN FIDRRRNYTK RYEEHIYEKV KELTVEQVSK 
NEQLSPEQVQ NIFQRIAKQK KKDWGKPERL GLDEFSRQKG QGNLVTVLSN LDEGSLLEVI 
DSHKSEEIIE VLKQAPISIR ENIKEVCVDM WGGFKKVITE VFPNALVVID RFHVMKLVHK 
ALNHLRLKLK LKGLKNRYLL LKNKVNLTEE EKKDLGELLR GYPCLSIAYE LKEELRNIYE 
NTRTVKEGLK KLKKWLRLAR VFFGKTAETL ELHLQNICNY FLNRTSNGVM EGLNNKIKLI 
LRQSYGFSNF KFMREKLLAC LFK