Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5146 |
Symbol | |
ID | 7108045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 5715548 |
End bp | 5716207 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643483355 |
Product | RNA polymerase sigma factor RpoE |
Protein accession | YP_002380364 |
Protein GI | 218442035 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 5.449200000000001e-25 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGTCAAT CGATTCCCGC AACCTGGTCA ACACTTGAGG CTAAAAAAAC CCGTAGCCAA GTGTCTCCTG ACAAACTCTC AAATTACGAT TTGATTTTAC GATGTCAGGA AGGATTGCAG CCAGATAGAA TGGCATTTGC AGAACTTCTG CGCCGCTATC AATCTCATGT AGACAAACTT CTATATCATT TAGCCCCAGA TTGGCAAGAT CGAGCAGATT TAGCTCAAGA AGTGTGGATT AGAGTGTATC GCAATATCAA ACGTCTAAAC GAACCTCTCA AATTCCGGGG CTGGCTCAGT CGAATTGCGA CCAACTTATT CTATGATGAG TTACGCAAGC GCAAAAGAGT AAGTAATCCT GTCTCTTTAG ATGCACCCCG AAGAGTCGAT GATGGAGAAA TAGACTGGGA TATTGTTTCT GATTATCCGT CTCCCGATGA TAATCTGGCA ACCCGTGAGT TTTACGAGCA ACTGAGACTA GCGATCGCCG ACTTACCCGA AGCATTCCGG ACAACTATCG TTTTGCGAGA AATAGAAGGA ATGGCATATG AAGAAATAGC AGAAATCACC GGCGTTTCTT TAGGAACTGT TAAGTCAAGA ATAGCTAGAG CCAGAGCTAA GTTACAATCT GTGTTGCAAC CTTATTTAGG AGACAGCTAA
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Protein sequence | MSQSIPATWS TLEAKKTRSQ VSPDKLSNYD LILRCQEGLQ PDRMAFAELL RRYQSHVDKL LYHLAPDWQD RADLAQEVWI RVYRNIKRLN EPLKFRGWLS RIATNLFYDE LRKRKRVSNP VSLDAPRRVD DGEIDWDIVS DYPSPDDNLA TREFYEQLRL AIADLPEAFR TTIVLREIEG MAYEEIAEIT GVSLGTVKSR IARARAKLQS VLQPYLGDS
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