Gene PCC7424_5143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5143 
SymboldapF 
ID7108042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5713605 
End bp5714450 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content44% 
IMG OID643483352 
Productdiaminopimelate epimerase 
Protein accessionYP_002380361 
Protein GI218442032 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.75804e-23 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCATCG AATTTACAAA GTATCATGGT TTAGGTAATG ATTTTATCTT AATAGATAAT 
CGTCACGGTT CAGAGCCGAT GGTTTCTCCC GAAATGGCTG TCGAGATGTG CGATCGACAT
TTTGGCATTG GGGCGGATGG GGTGATTTTT GTGTTGCCGG GAACGTCACA GACAGATTAT
CAGATGCGAA TCTTTAATAG TGATGGTTCA GAACCGGAAA TGTGTGGGAA TGGAATTCGC
TGTTTAGCCC AATTTATTGC CGAGTTAGAA AAAACGACTG AAGTCGGAAA ATCTTACCGA
ATTGATACGT TAGGGGGGTT AATGACTCCT CGCTTAGAAG CCCAAGAACA AGTTACCGTA
GATATGGGAC TTCCTCGCCT TTTAGGGTCA GAAATTCCCA CAACTTTAGT CTCCAGAACA
GAAAAGGTTA TTGATCAACC TATAGAAGTG GCCGGTCAAT CTTGGTTAGT GACTTGTGTG
AGTATGGGCA ATCCTCACTG TATCACTTTT GTTGAGGATG TTAAGAGTAT TGCTTTAGAA
ACGATCGGCC CTCAATTTGA ACATCATGTC GCATTCCCCC AAAGAACCAA TACTGAATTT
ATCGAGGTGC TACGTCCTGA TTATTTAAAA ATGCGGGTTT GGGAAAGAGG CGCTGGTATT
ACTTTAGCTT GTGGGACGGG GGCTTGTGCT TCTGTGGTGG CTGGAGTGTT GACGGGTAAA
AGCGATCGCC GGTGTACGGT AGAATTACCG GGAGGTTGTC TGAGTATTTA TTGGTCAGAA
ACCGATGGTC ATGTTTATAT GACTGGGCCG GCTAAACGGG TGTTTACTGG GGTTTATGAG
ATGTAG
 
Protein sequence
MGIEFTKYHG LGNDFILIDN RHGSEPMVSP EMAVEMCDRH FGIGADGVIF VLPGTSQTDY 
QMRIFNSDGS EPEMCGNGIR CLAQFIAELE KTTEVGKSYR IDTLGGLMTP RLEAQEQVTV
DMGLPRLLGS EIPTTLVSRT EKVIDQPIEV AGQSWLVTCV SMGNPHCITF VEDVKSIALE
TIGPQFEHHV AFPQRTNTEF IEVLRPDYLK MRVWERGAGI TLACGTGACA SVVAGVLTGK
SDRRCTVELP GGCLSIYWSE TDGHVYMTGP AKRVFTGVYE M