Gene PCC7424_5133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5133 
Symbol 
ID7108032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand- 
Start bp5698553 
End bp5699107 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content39% 
IMG OID643483342 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_002380351 
Protein GI218442022 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0000000140851 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCAAAAAC TTCTTCGTAT TGCCAGCGTC ATCGATACTA TCAATGAATG GATAGGACGA 
TTAACCTATT GGCTAGTTCT AGCTATGGTT TTTATCGGAG TTTGGAATGT AGTCGGACGA 
TATTTAGGCC GGTTTTTTGG GCAAAATTTG ACTTCTAATG GGTTGATAGA AGCCCAATGG 
TATTTGTTTG ATATAGTTTT TCTTTTGGGG GCAGCTTACG CTTTGAAACA TGATGATCAT 
GTTCGCGTCG ACATATTTTA CAAAAATTGG GGGACAAAAG GCAAAGCTCT GACCAATTTC 
ATCGGAACTT TTATTTTTCT TATTCCCTTT TGTATCATGG TCATTTACTT TTCCTGGACA 
ACAATTGTCG ATTCTTGTTT AATTTGGGAA ATGTCTTCTG ATCCGGGGGG CTTGCCTCGT 
TGCCCGATTA AGGTGATGAT TTTAGTAAGC TATGGTCTCC TTATTTTACA AGGCATTTCA 
GAAGGGATTA AAAATTGGGC AATTTACACC AATCAACTGA TTCCCCAGGA GGAAATACAC 
AACAATGGCT TATGA
 
Protein sequence
MQKLLRIASV IDTINEWIGR LTYWLVLAMV FIGVWNVVGR YLGRFFGQNL TSNGLIEAQW 
YLFDIVFLLG AAYALKHDDH VRVDIFYKNW GTKGKALTNF IGTFIFLIPF CIMVIYFSWT 
TIVDSCLIWE MSSDPGGLPR CPIKVMILVS YGLLILQGIS EGIKNWAIYT NQLIPQEEIH 
NNGL