Gene PCC7424_5115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5115 
Symbol 
ID7108014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5678562 
End bp5679728 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content39% 
IMG OID643483325 
Producthypothetical protein 
Protein accessionYP_002380334 
Protein GI218442005 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.503544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGT CAACCAGCCC ACAAATACAA GTGATCGATA CTCCTATTAT GTTATTTAAC 
GGAACGACTG TCAGCAAAAC CACAGCCGGA GCGGCGGCGG CTGTATTGCT AATGCCTAAC
GGTAGACGTT ACACAGTCAG TCAATTTCTC TCTAAAGCGT CTAAAGGAGA AGCGGAATAC
CAAGGTTTAA TTATCGGACT GCAAAAAGCC CAAAAATTGG GCATTCGTCA GTTGGACGTT
AAGGGAGACA GTAAAGTTCT ATTTCATCAA ATTCAAGGAT TGACGACGAT TAAAGAGGAT
CAACTGTTGA GGTTGTATAA TCAAGCTTTG AAACTGATTC ATCGCTTTGA GAAAGTGTCT
TTTGAGTTAA TTTCTCCTGA ACAAAATCGT TCCGCCATCA CCGCAGTCAA TCGTTGTATG
GCAGAAGCGT TAGGGGTTGA CTCTCAACCG ACTACATCAA CACCCCCTCA CATTTCTCCT
CATGTAGCTC GGTTAATAAA ATTAGGCTCT CAAGCAAGTG ATAAAGATTA TAAAAATTTA
ACGGTTAAAT CCGATGATTT TAGTATCAAG TCTTTATCTC AATTAAGAGA ATTAGTGCCT
AATTCTATTC GAGATGAAAT TGCTCTCAAA TGGGATGGAA AAGATGAACA TCTAACGGAA
ATTTATCGCT GGTATCTTCG GGGTTTATCC CCTACTATGG CCATCCGCAA AGTCGAAATT
GACACCGACG CTGAAAAGCA ATTGCAACAC CCAGAAAAGT TACCTTGGGA AGGAGAACTT
ATCATCAATC CTGACCTAGA AAATGAACCT AGACAAGGAG AAAATTCTTA TCTGTCTTCG
ACGTTGCCTA ATGACTCTTT AGAAATATGG ACAAACCCCA AGATCAGATT TCCCTTGATC
GAAGAAATTG AAGAAAATCA AGATCATGAA GATTTTTCCT TCATTTCTGA GTTACCCGAT
GCTCCTATTA CCGAAATTGA CCCTGATATC ACTCTCATTT CAGCCGGAGA AAATTCCCTT
GAAAAAGTTA TCCATATTGT TGATTTGATT GATACTTTAT CTTTAGAACA AAAAACTCAT
TTAGTTCAAG AGTTGGTCAA ATCTCCCGAT GTGGTTAATT TAATTCTTAA AGCGATCGCT
GCTCAAATGA CAGGGGAACA AAAATAA
 
Protein sequence
MSESTSPQIQ VIDTPIMLFN GTTVSKTTAG AAAAVLLMPN GRRYTVSQFL SKASKGEAEY 
QGLIIGLQKA QKLGIRQLDV KGDSKVLFHQ IQGLTTIKED QLLRLYNQAL KLIHRFEKVS
FELISPEQNR SAITAVNRCM AEALGVDSQP TTSTPPHISP HVARLIKLGS QASDKDYKNL
TVKSDDFSIK SLSQLRELVP NSIRDEIALK WDGKDEHLTE IYRWYLRGLS PTMAIRKVEI
DTDAEKQLQH PEKLPWEGEL IINPDLENEP RQGENSYLSS TLPNDSLEIW TNPKIRFPLI
EEIEENQDHE DFSFISELPD APITEIDPDI TLISAGENSL EKVIHIVDLI DTLSLEQKTH
LVQELVKSPD VVNLILKAIA AQMTGEQK