| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5102 |
|---|
| Symbol | |
|---|
| ID | 7108001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 5664194 |
|---|
| End bp | 5665027 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643483312 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_002380321 |
|---|
| Protein GI | 218441992 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGAAT TACCCGAAGT TGAAACGGTT TGCCGGGGTC TCAATCAATT GACCCTTGGG
CAACCTATAG AGGGTGGGGA AGTGTTACTA CCCAGGACAC TGGCCTACCC TTTTTCTATT
GCTGAGTTTT GGGAAGGGAT CACAGGAACA AAAATTAATC TTTGGCAACG TCGAGGTAAA
TATTTATTAG CCCTACTGGA CTGTGGGGGA TATTTAGGGG TTCATCTCCG CATGACGGGT
CAATTATTAT GGGTAAAACG CGATATTTCC TACCCCAAAC ATACCCGTCT CCGTTTATTT
TTAGGGGAAG ACCAAGAGTT AAGGTTTGTC GATACCCGGA CTTTTGGGAA AGTCTGGTGG
ATACCGCCGG ATCAATCTCC AGAAAAGATT ATCACTGGGT TACAAAAGTT AGGGGTTGAA
CCTTTTTCTC AAGCGTTTTC TGTTGAGTAT TTACAACACA AGTTAAAAAC TAGCCGGCGC
AAGATTAAAA GTGTTCTGTT GGATCAGGAA GTGGTGGCCG GCATCGGTAA TATTTATGCG
GATGAGGCTT TGTTTAAAAG TGGGATTCGA CCAGATGCGA TCGCTTGTTC TTTGACTCCT
CAACAGTTGG AAAAACTTCG TTGGGCTATT TGTGACGTTT TGCAAACATC TATTGACAAA
GGGGGCACGA CGTTTAGCGA TTTTTTGAGT GTGACTGGGG TCAATGGGAA TTATGGAGGG
GTGGCCTGGG TCTACGGTCG TGGGGGCGAG TCTTGCCGGG TTTGTGGGAC ACCCATAGAA
CGGGTTAAGT TGGGGGGGCG ATCGTCTCAT TTTTGTCCCT CTTGTCAGGG TTGA
|
|---|
| Protein sequence | MPELPEVETV CRGLNQLTLG QPIEGGEVLL PRTLAYPFSI AEFWEGITGT KINLWQRRGK
YLLALLDCGG YLGVHLRMTG QLLWVKRDIS YPKHTRLRLF LGEDQELRFV DTRTFGKVWW
IPPDQSPEKI ITGLQKLGVE PFSQAFSVEY LQHKLKTSRR KIKSVLLDQE VVAGIGNIYA
DEALFKSGIR PDAIACSLTP QQLEKLRWAI CDVLQTSIDK GGTTFSDFLS VTGVNGNYGG
VAWVYGRGGE SCRVCGTPIE RVKLGGRSSH FCPSCQG
|
|---|
| |