| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4926 |
|---|
| Symbol | |
|---|
| ID | 7106992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 5466748 |
|---|
| End bp | 5467956 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643483139 |
|---|
| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
|---|
| Protein accession | YP_002380149 |
|---|
| Protein GI | 218441820 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.0636737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACAA AAGCTTTTAA ACGTTCATTA CAACAGTCTG AAAACTACCA CCGCAAAGGA
TTTGGCCAAG AAGATGAAGC GATGGGGGTA ATGAATAGTG AATATCAGAG TTCTTTAATC
CAAGAAATTC GTAATAATAA CTATAGACTA ACTCAGGGAG ATGTCACCAT TCGTCTAGCA
GAGGCGTTTG GGTTTTGTTG GGGAGTTGAA AGGGCGGTGG CGATGTCTTA TGAAACCCGT
CAACATTTTC CTAATCAACG GATATGGTTA ACCAATGAGG TGATACATAA TCCTTCTGTT
AACCAGCGCC TACGAGATAT GAAAGTAGAA TTTATTCCCG TCATTGAAGA TCAAAAAGAT
TTTAGCGTAG TTGAACGGGA TGATGTGGTT ATTTTACCGG CATTTGGGGC CAGTGTTACC
GAAATGCAAT TGCTCAATGA TAAAGGGTGT ACGATTGTAG ATACAACTTG TCCTTGGGTA
GCTAAAGTTT GGAATTCCGT AGAAAAACAC AAAAAACGTA ACTATACTTC TATTATTCAC
GGTAAATATA AACATGAAGA AACTGTTGCT ACCAGTTCTT TTGCCGGAAC TTATTTAGTG
GTTTTGAATA TGGAACAGGC GAAATATGTT TGTAATTATA TTCTCAATGG TGGAGATAAA
CAGGAGTTTT TAGCTAAGTT TAAAAAAGCC TATTCTGAGG GATTTGATCC GGATACAGAT
TTAGAGAGAG TGGGAATTGC CAATCAAACC ACCATGTTAA AGAGTGAAAC CGAGGAAATT
GGTAAACTCT TTGAACATAC CATGTTGAAA AAGTATGGTC CCTTAGACTT AAATAATCAT
TTTATGAGTT TTAATACCAT CTGTGACGCG ACTCAAGAAC GTCAAGATGC CATGCTTGAT
TTAGTGAAAG AAAAGTTAGA TTTAATGGTC GTGATTGGAG GATTTAATTC TTCTAATACT
ACTCACTTAC AAGAAATTTC CATTCATCAT GGTATTGTCT CTTATCATAT TGATAGTGCG
GCCAGAATTG ACCTGAATAA CCACATTGAA CATAAACCCT TGGGGAAAGA TTTAGAGGTC
AAAGAAAATT GGCTTCCTGA TGGTAAAATT GTCGTCGGCG TGACTTCTGG CGCTTCTACT
CCTGATATTG TCGTGGAACA GGTATTACAG AAAATTTTTG CGATTAAATC TGCTGTAGCG
ATGGTTTAA
|
|---|
| Protein sequence | MDTKAFKRSL QQSENYHRKG FGQEDEAMGV MNSEYQSSLI QEIRNNNYRL TQGDVTIRLA
EAFGFCWGVE RAVAMSYETR QHFPNQRIWL TNEVIHNPSV NQRLRDMKVE FIPVIEDQKD
FSVVERDDVV ILPAFGASVT EMQLLNDKGC TIVDTTCPWV AKVWNSVEKH KKRNYTSIIH
GKYKHEETVA TSSFAGTYLV VLNMEQAKYV CNYILNGGDK QEFLAKFKKA YSEGFDPDTD
LERVGIANQT TMLKSETEEI GKLFEHTMLK KYGPLDLNNH FMSFNTICDA TQERQDAMLD
LVKEKLDLMV VIGGFNSSNT THLQEISIHH GIVSYHIDSA ARIDLNNHIE HKPLGKDLEV
KENWLPDGKI VVGVTSGAST PDIVVEQVLQ KIFAIKSAVA MV
|
|---|
| |