| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4869 |
|---|
| Symbol | |
|---|
| ID | 7110965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 5403853 |
|---|
| End bp | 5405562 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643483083 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002380094 |
|---|
| Protein GI | 218441765 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5305] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTGA GGATCAATCA AAGCCCCAAG GTTCAAACTC GAAATCATTA TGATTGGGTA
TTATTATTGT CGTGGACGGT GTTAGGGTGT TGGTTAAGGT TTTTAAATTT AACAGCTAAA
CCTCCTTGGA CAGATGAATT TGCGACTATG GTTTTTAGCC TGGGTAATCA TTATAATTCG
GTATTACTGG ATCAAGTTAT TTCTCTTGAA GGGCTGTTAT CTCCTCTAAA ATTTAACCCA
GACACGACTA TTTTTGAAGT AGTTTCTCTG TTATTACAGG AGGATAATCA TCCTCCTCTT
TATTTTATTT TAGCTCATTG GTGGATGAAA TTATTTCCTC TTGATGGGGA ATATATGTCG
GTTTTGGCAG CCCGATCGCT TCCGGCTTTA TTAGGAGGAT TGTCAATTCC GGCGGTGTAT
ATTTTAGGGC GTATTGCTTT TAGTTCTCGG TTAGTAGGAC AGTTATCAGC GATGATGATG
GCGGTTTCTC CCTATGGGGT TTTTATTGCT CAAGAAGCCC GACATTATAC CCTAGGAATT
TTGTTAGTGA TTTTTTCTTT ATGTTGCTTA GTGATCGCTG TCAAACAGAT TGAAAAAGGA
GTGATTATTT CTGCGGGTTT AATGTTGATT TGGATTACTC TTAATTGTTT AGGATTAGGG
GTTCATTACT TTTTTATCCT CACTCTTTGC GCCCAAGGGA TGAGCTTACT TTTTAACCTC
CCTTATCAAT TGAGAAGAAC ATTAATTTGG CGAAAAAATT GCTGGCGTTT AGGGTTAGTT
GCTCTATTTA CTCTAACGTT AGGGATGAGT TGGGTGTTAT GGATAATTCC CCAGGATTAC
GGAAAGGGAA TGACCGAATG GATTCGCCCA GATAATTGGA GTTTGTTATC TTTAATTAGT
CCTATTTTTC AATTATTAGC GGCTTGGGTA ACGATGATTA TTCTACTCCC TATTGAGTCA
TCTTATTTTC CGTTAGTTAT TTTTTCGGGC TTACTCATGT TATTTTTTTT GGTTTGGTCT
ATTCCTAAAT TGAATCGGGG ATTAAAAATC TGTTATCAAA ATCTTAATTA TCGTTTAGGA
ATAAAACTTT TACTCGGATT TGTTTTGAGT GCGATCGCTC TGTTTTTTGG GATGACTTAT
TTTTTGAGAA TAGATATTAC TAGAGGGGCA CGGTACAGTT TTGTTTATTT TCCGGCTATT
CCGGTTTTGT TAGGCGGGAT TTTATCGGTT TTTTGGAATC CCTATTATTT AAATTTAACC
CGCTATTTTC GTCAATCTCA AATGACGGTT TTAATCATCG GATTCATAGG ATTATTAAGT
GCTATGACTA TAAATTTTGA TTTAGGATAT CAAAAATATT ACTTACCGAA TCAATTAGTC
AAAGTGATTG AAAAAACCTC ATCAAATCAA GTTTTAATTG CCACGACTCA TCAAAATTTA
GTCCAGACAG GAGAAATGAT GGGTATTGGT TGGGAACTTT ATAAAAATCC CTTACCGATA
GACATTAAAT TTTTACTAGC TCATACACCC TTAAATGATT CAAAGAGTGC AATAATGACT
TTACAAGCTA ATCTCAATCA ACTGTCTCGT CCTTTAGATG TTTGGCTGGT AAATTTTAAA
GCGTCTGTCG AGTTAAAGAA TTGTGAGGCG GATTTTGATA ATTTTTCGGA AATCAATGGT
TATAATTATC AACGATACCA TTGTTTTTGA
|
|---|
| Protein sequence | MRLRINQSPK VQTRNHYDWV LLLSWTVLGC WLRFLNLTAK PPWTDEFATM VFSLGNHYNS
VLLDQVISLE GLLSPLKFNP DTTIFEVVSL LLQEDNHPPL YFILAHWWMK LFPLDGEYMS
VLAARSLPAL LGGLSIPAVY ILGRIAFSSR LVGQLSAMMM AVSPYGVFIA QEARHYTLGI
LLVIFSLCCL VIAVKQIEKG VIISAGLMLI WITLNCLGLG VHYFFILTLC AQGMSLLFNL
PYQLRRTLIW RKNCWRLGLV ALFTLTLGMS WVLWIIPQDY GKGMTEWIRP DNWSLLSLIS
PIFQLLAAWV TMIILLPIES SYFPLVIFSG LLMLFFLVWS IPKLNRGLKI CYQNLNYRLG
IKLLLGFVLS AIALFFGMTY FLRIDITRGA RYSFVYFPAI PVLLGGILSV FWNPYYLNLT
RYFRQSQMTV LIIGFIGLLS AMTINFDLGY QKYYLPNQLV KVIEKTSSNQ VLIATTHQNL
VQTGEMMGIG WELYKNPLPI DIKFLLAHTP LNDSKSAIMT LQANLNQLSR PLDVWLVNFK
ASVELKNCEA DFDNFSEING YNYQRYHCF
|
|---|
| |