| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4778 |
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| Symbol | |
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| ID | 7110872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 5306171 |
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| End bp | 5307754 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643482992 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_002380004 |
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| Protein GI | 218441675 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit
[TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.801669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAG TTCTCGTATC CGATCCAATT GATCAAGTAG GCATTGATAT TCTCTCTCAA
GTAGCCCAAG TGGATGTTCA AACCAAGCTA TCACCAGAAG AATTGATCAA GATCATCCCT
GAATATGATG CTTTAATGCT GCGTTCTCAA ACGAAAGTCA CCAAAGAAGT GGTTGAGGCT
GGAACTCAAC TGAAAATTAT TGGACGAGCC GGTGTCGGGG TAGATAATAT CGATGTGCCA
GCCGCTACCC GTCAAGGAAT TGTGGTGGTT AACTCTCCTG AAGGAAATAC CATTGCGGCG
GCGGAACACG CTTTAGCGAT GATGTTATCC CTCTCTCGTC ATATTCCTGA TGCTAACCAG
TCCGTTAAAG AGAACAAATG GGATCGCAAA CGGTTTATGG GCACAGAAGT CTATAAAAAA
ACCTTGGGAG TCGTCGGGTT AGGAAAAATC GGCTCTCATG TGGCCGGTGT GGGAAAATCC
CTCGGAATGA AATTACTGGC TTATGATCCC TTCATTTCTA AAGAACGGGC AGATCAGATC
GGCTGTACTT TAGTTGATCT AGATTTACTT TTCTCTGAAG CTGATTATAT TACCCTACAC
ATTCCCAAAA CCCCAGACAC GACTCATTTG ATTAACCAAG AAGCGTTAGC CAAAATGAAG
CCTAACGTCC GCATTATCAA TTGTGCTAGA GGAGGGGTGA TCGATGAGGA TGCTTTAGCC
GAATTTTTAC AAGAGCATCC CGATGCCGGT GCTGCCTTAG ACGTTTTTGA ACAAGAACCT
TTAGGGGAAT CTAAACTTAG AGGACTGCCT AATGTGATTT TAACCCCTCA TTTGGGAGCA
TCCACCGCAG AAGCTCAAGT TAATGTGGCC ATTGATGTGG CTGAACAAAT TAGGGATGTT
TTATTAGGAC TTCCGGCGCG ATCGGCAGTT AATATTCCTG GGTTAACCCC GGATGTGATG
GAAAAACTAA GACCCTATCT ACAATTAGCG GAAACCTTGG GCAATTTAGT CGCTCAACTC
GCCGGGGGAC GAATTGAACA GTTAACCGTT AGATTACAAG GAGATTTAGC CGCTAATGAA
ACTCAGCCGA TCGTGGTGGC GGCGATTAAA GGATTATTAT CTGAAGCCTT GCGGGAACGG
GTTAATTATG TTAATGCGGC CATTGAAGCC AAAGAACGGG GTATTCGCGT CATAGAAACT
CGTGATGCTT CGATTAGGGA TTATTCCGGC TCTTTGCATC TAGAAGCTAA AGGCTCAATG
GGAGAGCATT CGGTAACGGG CGCTCTTTTA AGTAATGGAG AAATTCGCAT CACCGATCTT
GATGAGTTCC CGATTAACGT TCCTCCCAGT AATTATATGC TCTTTACCTT GCACCGAGAT
ATGCCCGGTA TTATTGGTAA AATAGGGTCA TTATTGGGGA GTTTTAATGT CAATATTGCG
AGTATGCAAG TGGGACGCAA GATTGTTCGC GGAGATGCGG TGATGGCTCT GAGTTTGGAT
GATCCTCTAC CGGAAGGCAT TCTTTCAGAA ATTACCAAAG TAGCCGGTAT CCGAGATGCT
TATACCGTCA AACTCTCAAT CTAG
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| Protein sequence | MAKVLVSDPI DQVGIDILSQ VAQVDVQTKL SPEELIKIIP EYDALMLRSQ TKVTKEVVEA
GTQLKIIGRA GVGVDNIDVP AATRQGIVVV NSPEGNTIAA AEHALAMMLS LSRHIPDANQ
SVKENKWDRK RFMGTEVYKK TLGVVGLGKI GSHVAGVGKS LGMKLLAYDP FISKERADQI
GCTLVDLDLL FSEADYITLH IPKTPDTTHL INQEALAKMK PNVRIINCAR GGVIDEDALA
EFLQEHPDAG AALDVFEQEP LGESKLRGLP NVILTPHLGA STAEAQVNVA IDVAEQIRDV
LLGLPARSAV NIPGLTPDVM EKLRPYLQLA ETLGNLVAQL AGGRIEQLTV RLQGDLAANE
TQPIVVAAIK GLLSEALRER VNYVNAAIEA KERGIRVIET RDASIRDYSG SLHLEAKGSM
GEHSVTGALL SNGEIRITDL DEFPINVPPS NYMLFTLHRD MPGIIGKIGS LLGSFNVNIA
SMQVGRKIVR GDAVMALSLD DPLPEGILSE ITKVAGIRDA YTVKLSI
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