Gene PCC7424_4657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4657 
Symbol 
ID7107674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp5161406 
End bp5162500 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content47% 
IMG OID643482874 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002379887 
Protein GI218441558 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.000431802 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCGGC AACACCGGAT AACCTTACTT CCTGGCGATG GGATTGGCCC AGAAATTCTG 
TCCGTCACCG TAGATGTCTT AAAAACCATT GGTAAACAAT TCGACATACA ATTTGAGTTT 
CAAGAAGCCC TCATCGGCGG TGCTGCCATT GATGCAACGG GAAACCCTCT ACCGGAAGAA 
ACTTTAACCC TGTGTCGTAA TAGTGATGCC GTTCTTCTAG CGGCCATTGG GGGGTATCAA 
TGGGACAGTT TACCCCGTCA TCAACGCCCA GAAACCGGAT TATTAGGCAT TAGAGCCGGT 
TTGGGCTTAT TTGCCAACTT ACGCCCGGCG ACTATTTTAC CTCAGTTAAT TGATGCTTCT 
ACCCTCAAAC GAGAAGTGGT AGAAGGGGTA GATATTATGG TGGTGCGAGA ACTAACCGGC 
GGGATCTATT TTGGTCAACC CAAAGGCATT TTTGAGACAG AAACCGGGGA AAAACGGGGA 
GTCAATACGA TGGCTTACAC AGACTCAGAA GTTGACCGCA TTGCTAAAAT AGGCTTTGAA 
ACCGCCCAAA AACGCTCCGG CAAACTTTGC TCGGTAGATA AGGCTAATGT ATTAGATGTG 
TCTCAATTAT GGCGCGATCG CGTCACCTTA ATGGGGAAAA ACTACCCAGA TGTAGACCTG 
TCCCATATGT ATGTCGATAA TGCCGCCATG CAGCTAGTCC GCAATCCGAA ACAATTTGAT 
ACCATTGTGA CTGGTAATAT GTTTGGGGAT ATTCTCTCCG ATGCCGCCGC CATGTTAACC 
GGTAGTATTG GGATGTTACC TTCTGCCAGT TTAGGCGCAG ATGGGCCAGG ATTATTTGAA 
CCCGTTCATG GATCAGCCCC AGACATTGCC GGACAAAACA AAGCTAACCC TCTAGCTCAA 
GTTCTCAGTG CCGCGATGAT GTTACGATAT GGGTTAAACG AACCCGAAGC CGCCAGTAAA 
ATTGAACAAG GCGTTTTAGC CGTCTTAGAA AAAGGATACC GCACCGGGGA TATTATGTCA 
GAAGGAATGA CCTGGGTGGG ATGTCAAGAA ATGGGGGAAG TTTTAATGAA TGTCTTAGAA 
TCTTTACATC AATAA
 
Protein sequence
MTRQHRITLL PGDGIGPEIL SVTVDVLKTI GKQFDIQFEF QEALIGGAAI DATGNPLPEE 
TLTLCRNSDA VLLAAIGGYQ WDSLPRHQRP ETGLLGIRAG LGLFANLRPA TILPQLIDAS 
TLKREVVEGV DIMVVRELTG GIYFGQPKGI FETETGEKRG VNTMAYTDSE VDRIAKIGFE 
TAQKRSGKLC SVDKANVLDV SQLWRDRVTL MGKNYPDVDL SHMYVDNAAM QLVRNPKQFD 
TIVTGNMFGD ILSDAAAMLT GSIGMLPSAS LGADGPGLFE PVHGSAPDIA GQNKANPLAQ 
VLSAAMMLRY GLNEPEAASK IEQGVLAVLE KGYRTGDIMS EGMTWVGCQE MGEVLMNVLE 
SLHQ