Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4620 |
Symbol | |
ID | 7107637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 5122143 |
End bp | 5124935 |
Gene Length | 2793 bp |
Protein Length | 930 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643482837 |
Product | malto-oligosyltrehalose synthase |
Protein accession | YP_002379850 |
Protein GI | 218441521 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3280] Maltooligosyl trehalose synthase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02401] malto-oligosyltrehalose synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.026371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAATTC CTACAGCGAC TTATCGACTA CAATTTTGGT CTAACTTTGG CTTTAATGAA GCAAAAAAAA TTGTTAACTA TCTTTCAGAA TTAGGGATTT CTGATCTATA TGCTTCCCCT ATTTTTAAAG CTAGATCAGG TAGCACGCAC GGTTATGACG TGGTAGATGC TAATGTCCTT AACCCAGAAT TAGGCACAGA AGAAGATTTT AATAATTTAA TCGCTGACTT ACAAAATAAA GGGATGGGAT GGGTTCAAGA TATTGTTCCT AACCATCGTG CTTATGATAG TGACAATAAA GCTTTAATGG ACGTTCTCGA ACATGGAAAA GACTCAGAAT ACTACACCTT TTTTGATATT GAGTGGGAAC ATCATTATGA AGATCTTAGA GAAAAAGTCT TAACTCCTAT GCTAGGAGAT TTTTATGGGA ATTGTTTAGA AAACGGAGAC ATACAACTAA GTTATGATGA ATCAGGGTTA AGCGTAAAAT GTTATGATTC TTTTAAACTT CCTCTGAGGA TTGAAACCTA CCTAAAATTA TTAAGCCATG ACTTGGGGAA ATTAAACCGT CAACTCGGAC GGAGTCATCC TGATTTTATT AAAATTTTGG GAATTCTTTA CCTAATTAAA AATGTTTTCT CAGAAGCATC AGGAAGACAA CGAAAAGATC AGGTTGAGTT TATTCAAGGA CTTGTCTGGG AACTTTATAA TAATAATCCC GAAGTTCAAA CTTTCATCGA TCAAAATATA GCGACTTTTA ATGGAGAAGT AGGGAAACCT GAAACTTTTG ATTTATTAGA TCAATTATTG AGTGAACAAT TTTTCCGGTT ATCTTTTTGG AAAGTCGGAG CAGAAGAACT CAATTATCGT CGCTTTTTTA CGGTTAATGA GTTAATTTGT TTACGGGTAG AAGATGAGTT AGTATTTAAG AAAACTCATG AATTGATTTG TCAATTGGTT CAATCCGGCA AAATAACGGG GTTAAGAATC GATCATATTG ATGGACTTTA TGATCCGACT CAATATTTAT TTCGTCTTCG AGAAATGATG GGAGATGTTT ATCTCGTTGT GGAAAAAATC CTCGAAAAAG AGGAAAAACT TCCCAGTCAT TGGCCAATTG AAGGAACGTC AGGGTATGAT ACTCTTAACC GGATTAATGG GGTATTTTGC CAAACCTCTA ATCAAGACAA ATTCAGCGAA ATTTACACCA AATTGACTCG GTTTCATGAC GACTATGAAA AACTCTTAAG TGAGAAAAAA CATCTAATCG CTGAAACGAA TTTAGTCGGG GATATTGATA ACTTAGCTCA TCTGCTGAAA CGCATTGCCG AACAATCTCG CTATGGACGA GATTTTACTT TATCTGGGTT AAGAAAAGCC ATTTTAGAAG TATTAGTTCA ATTTCCGATT TATTGTACCT ATATTAACGA AAATGGAATA ACCGAAACCG ATCAAGGGTA TATTAGAGAA GCGATTGAAA AAGCTAAATC AGCGCTCCCG CGACTCCTCA AAGAATTAAA TTTAATTGAA AAATTCTTGT TACTAGATTA TGATGAGCAT CTCTCAGAAG AAGAAAAACA AAAATGGTTA CATTTTACGA TGAGATTTCA ACAATTTACA GGGCCGTTGA TGGCCAAAGG AGTCGAAGAT ACTTTATTCT ATGTTTATGC TCGGTTTGTG TCTTTAAATG AAGTGGGAGG ATTTCCGCAA ACTTTTGGAG TTACCCTTGA AGAATTTAAT CAATTCAATC AACAGCAACT CGCTAATCAT CCTCATACGA TGAATGCGTC TTCTACCCAT GATACAAAAC GGAGTGAAGA TGTCAGAGCA AGATTAAATG TCATTTCAGA AATTCCCGAC GAATGGGAAC GACAAATCAA CGAATGGCGT AATCTAAACA AAGATAAAAA AACTATCAAA GGCAAACGAA TTATTCCCGA TAATAATGAC GAATATTTCT TTTATCAAAA TCTTTTAGGT GCTTTTCCTT TGGATGAAGA GGAATATCCC GATTTTGTAG AACGAGTTAA AAATTATATC ATCAAAGCCG TCAGAGAAGC TAAAATTCAT ACCGCTTGGT TACGTCCCGA TCATGTTTAT GAAGACGGGT TTCTTCACTT TGTTGAGCAA GTTCTTCAAC CGGAAAATAA CCCATTTTTA GAGCAATTTC GAGAGTTTAA AAATAAAGTT GCCCCCTATG GGTTATTTAA TTCTCTGTCC CAAACTTTAG TGAAAATCAC CTCTCCGGGA ATTCCCGACT TTTACCAAGG AACAGAATTA TGGGATTTTA GTTTAGTTGA TCCAGATAAC CGTCGTCCGG TGGACTATCA AAAACGATTA TCTTATTTAG AAGAGATTAA ACATCGCTCC CAAGATAATC TAAACGAGTT GATCCATGAA TTAACCCATA ATATGACTGA TGGTCGGATT AAATTATGGT TAATTATTCG AGCATTAGGA ATTAGAAATC AATATCTCTC GGTTTTTCAA CAAGGAGACT ATATTCCCTT ATCAGTTCAA GGTCAGTATA AAGATCATGT GATTGCTTAT GCAAGACACC AGGAAAAGAC AACCATCGTC ACCATTGTTC CTCGTTTTCT AACTGCCTTA ATTGAACCTT ATCAATATCC CACAGGAGAG CAAGTTTGGG GAGACACTTA TGTAGAACTT CCCTTTAATC TAGAGTCGGG ATGGAAAAAT TCCCTGACGG AAGAAACTCT CTCTCCAGGG GATAAACTCT CGATCGCTAA TATCTTAAAA TCTTTTCCGA TCGCTTTATT AATTAACGAC TAG
|
Protein sequence | MRIPTATYRL QFWSNFGFNE AKKIVNYLSE LGISDLYASP IFKARSGSTH GYDVVDANVL NPELGTEEDF NNLIADLQNK GMGWVQDIVP NHRAYDSDNK ALMDVLEHGK DSEYYTFFDI EWEHHYEDLR EKVLTPMLGD FYGNCLENGD IQLSYDESGL SVKCYDSFKL PLRIETYLKL LSHDLGKLNR QLGRSHPDFI KILGILYLIK NVFSEASGRQ RKDQVEFIQG LVWELYNNNP EVQTFIDQNI ATFNGEVGKP ETFDLLDQLL SEQFFRLSFW KVGAEELNYR RFFTVNELIC LRVEDELVFK KTHELICQLV QSGKITGLRI DHIDGLYDPT QYLFRLREMM GDVYLVVEKI LEKEEKLPSH WPIEGTSGYD TLNRINGVFC QTSNQDKFSE IYTKLTRFHD DYEKLLSEKK HLIAETNLVG DIDNLAHLLK RIAEQSRYGR DFTLSGLRKA ILEVLVQFPI YCTYINENGI TETDQGYIRE AIEKAKSALP RLLKELNLIE KFLLLDYDEH LSEEEKQKWL HFTMRFQQFT GPLMAKGVED TLFYVYARFV SLNEVGGFPQ TFGVTLEEFN QFNQQQLANH PHTMNASSTH DTKRSEDVRA RLNVISEIPD EWERQINEWR NLNKDKKTIK GKRIIPDNND EYFFYQNLLG AFPLDEEEYP DFVERVKNYI IKAVREAKIH TAWLRPDHVY EDGFLHFVEQ VLQPENNPFL EQFREFKNKV APYGLFNSLS QTLVKITSPG IPDFYQGTEL WDFSLVDPDN RRPVDYQKRL SYLEEIKHRS QDNLNELIHE LTHNMTDGRI KLWLIIRALG IRNQYLSVFQ QGDYIPLSVQ GQYKDHVIAY ARHQEKTTIV TIVPRFLTAL IEPYQYPTGE QVWGDTYVEL PFNLESGWKN SLTEETLSPG DKLSIANILK SFPIALLIND
|
| |