Gene PCC7424_4398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4398 
Symbol 
ID7111121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp4876189 
End bp4876980 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content43% 
IMG OID643482616 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002379630 
Protein GI218441301 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.184239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATTGG TTTATATCTC TATAGTTGAA GGGAATCCAC ATTTAAGATC ATTGCTAGCT 
TGGCATTTGC AGCAATCAGG CTATTTAGTG CAACAATTTG CGAATTTACA GCAAGCTAAA
CAAGCCTTTT TCCATCGTCA ACCCACGTTA GTCATCATAG ATTCGGATTT ACCCGATGGT
GACGGACTAG AGTTATGCGA ATGGTTATAC AAACAACGAC AGTCTTTAAT TCTCGTTTTA
TCAGCCCGAA ATGGAGAAAA AGACGTAGTT ACCGGGTTGC AAGCCGGAGC AGATGACTAT
CTGAGAAAAC CCTTCGGAAT GCAAGAATTT ATGGCAAGGG TAGAAGTCTT AGTCAGACGG
TTGAGGGTTT CTTCGGCCCC CTTACATCTC GATTATGGTG CTTTAAAAAT TGACTTGGCA
CAGCGCAGAG TTCAATATAA AGGAGAATAC ATCGAATTAA CTCCCCAAGA ATTTAGTTTA
CTCTACGTTT TAGCTCAAGC GGATGGCGCT CCCCTAACCC GTTCAGAATT ATTGCGACGT
GCTTGGCCGG AAGCCATTGA TAATCCTCGC ACTATCGATA CTCACGTCCT TTCTTTACGC
AAAAAAATCG AAACAGATCC CAGACAACCC AGTCTAATCC AAACTGTTCG CAATGTAGGT
TATCGATTTA ATATCGAAAC CCTCGAAGAA CTAAACTCTT CTCCTTCTCC GGCGGCGATC
GCTCCTTCTA ATGGGATTCC CTCTCATTCT AATGGGTCAA AGATGGAAAA AATAGCCGTC
AAATCCTCAT AA
 
Protein sequence
MGLVYISIVE GNPHLRSLLA WHLQQSGYLV QQFANLQQAK QAFFHRQPTL VIIDSDLPDG 
DGLELCEWLY KQRQSLILVL SARNGEKDVV TGLQAGADDY LRKPFGMQEF MARVEVLVRR
LRVSSAPLHL DYGALKIDLA QRRVQYKGEY IELTPQEFSL LYVLAQADGA PLTRSELLRR
AWPEAIDNPR TIDTHVLSLR KKIETDPRQP SLIQTVRNVG YRFNIETLEE LNSSPSPAAI
APSNGIPSHS NGSKMEKIAV KSS