Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4307 |
Symbol | |
ID | 7108229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 4774664 |
End bp | 4776616 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643482528 |
Product | GTP-binding protein HSR1-related |
Protein accession | YP_002379542 |
Protein GI | 218441213 |
COG category | [R] General function prediction only |
COG ID | [COG3596] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATACGGT TAAAATTATG GCAATGGATT ATATTAGCCA CCCCGATCGC CACTATTGTT GGATTTATTC TAGTAGCAGC CGGGCTACAA ATCCATCATT GGGGAGTTAA TTGGATTTGG GGCGTATTTA TCCTCTTAAT TGCCCTTTGG CAATGGTTAT TAGCGAGATG GACTCGGCCA GTTGTCCAAC AGATGGAAAC GGTGATCGCC GAAGTGAGTC AAGAACTCGA AACAACCCTC GCACAAACCC CAGAATTAAG CGATCAAGAA AATACGATTC AACAAGCAGA AACCGCCCTC AAAACTGTCT TAACTAACGC CGAAAATGAT CCCCCGATTT GGGAAGATTG GTCAATTTTT TGGCAACGAT GTCAAGAATT AGTCACAGCG ATCGCTAATA TTTTTTATCC CGATGTTAAA TATCCCCTCT TAAATATTTA CGTTCCCCAA GCGTACACTC TGATTCGAGG AACGGTAGAT GATTTAGATT TGTGGATGCA GAAATTATCT CCTGCCCTCA ATCAAGTCAG CATTGGGCAA GCGGTTCAAG CTTATGAAGT CTATCAAAAA TTAGAACCCT CTGCCCGCAA ACTCTGGAAA GTTTGGAATT GGGCACAATG GCTTTTAAAT CCTGTCGCCG CCACCGCCAA AGTCGCCAGT CAACGGTATA GTAATCAAGC AACTCAACAA TTATTAGTTA ATTTAGGTCA ATTGCTTAGA GAAGCCGCTT TAAGAAATTT AGCGAGACAG GCGATGCTTC TTTATGGCAA TATCGGTTTA ACCTTAGAAG AGCAAAAATC TGCTGTTTCC GTTCCCACTT TACCGAAAGC CAAAACCCAA ACCATTCGAG ATATTCTCTC TCAAGCTGAA CCGATCAAAC AAGTAGAACA AAAACCGGTT AATATTTTAG TGATCGGACG AACCGGAGCC GGTAAAAGTA GCCTCATTAA TACTCTATTT GCCTCAGAAT TAGCAGAAGT AGATGTATTA CCGAGTACGG ATGACATTTC TAGCTATCAT TGGCAATCTT CCCAGGGTGA CAGTCTTACT CTTTGGGATA CTCCCGGTTA TGAACAAGTC AAGCGAGACG ATTTACGAGA CTTAGTCTTA GATTATGCTC ACACAGCAGA TCTGTTACTC TTAGTTAATC CTGCCCTCGA TCCCGCCCTA CAGATGGATG TAGATTTTTT AGGAGAGATT CGCCAAGAAA TCGCCGATTT ACCGATGATT ACAGTGGTTA CTCAAGTCGA TCGCTTGCGC CCGATCCGGG AGTGGAATCC TCCCTATGAT TGGCAATGGG GCGATCGTCC CAAAGAAATA GCGATTCGAG AGGCGGTTAA CTATCGCGTA GAACGTTTAG AAGCGTTAAA ATCCGATCCC CATGTTGAGC CGGCAATACA GGTTTTACCG GTTGTCACCA GCGATTTTAA AACCGGTCGA ACGCCTTGGG GAGTAGAAAT GTTATCTTTG ACCTTATTAG AAGCGATCGC CCCTGCCCAA CAATTGCGAT TAGCTCGGTT TTTACGGAAT TTAGACGCTC GAACCCTGGC CGCGAGTAAG ATTATCGATG ATTATACCTT CCAAATGACC ACGACTCAAG GCTTAACCGC CTTTTTAAAA AGTCCGGTGT TGAAATTTAT TGCCACCTTA TCAACCGGTT CTCCAACTTT AGCCTATGTC TTAGCGGAAC AAATTCCCGT AGAACAACTG CCTGTAGTCA TTGGGAAACT TCAGATGGCT TATGACCTTT TTTCCCTTTT AAACCCCAAT AATACTCAAA AAAACAAGTT TGATTTACTC GCCCTGTGGC CATTATTATT AGAAAATCCT TCCTCTGCCG ATCGCAACGC TTGGGCGTTT GGTCATGCTT TAGTAGAGTA TTGGACACAA AATTTAACCA TTGCTCAACT CCAAGAACGA TTTAAACATT ATCTAAACCC CAATAATCAG TAA
|
Protein sequence | MIRLKLWQWI ILATPIATIV GFILVAAGLQ IHHWGVNWIW GVFILLIALW QWLLARWTRP VVQQMETVIA EVSQELETTL AQTPELSDQE NTIQQAETAL KTVLTNAEND PPIWEDWSIF WQRCQELVTA IANIFYPDVK YPLLNIYVPQ AYTLIRGTVD DLDLWMQKLS PALNQVSIGQ AVQAYEVYQK LEPSARKLWK VWNWAQWLLN PVAATAKVAS QRYSNQATQQ LLVNLGQLLR EAALRNLARQ AMLLYGNIGL TLEEQKSAVS VPTLPKAKTQ TIRDILSQAE PIKQVEQKPV NILVIGRTGA GKSSLINTLF ASELAEVDVL PSTDDISSYH WQSSQGDSLT LWDTPGYEQV KRDDLRDLVL DYAHTADLLL LVNPALDPAL QMDVDFLGEI RQEIADLPMI TVVTQVDRLR PIREWNPPYD WQWGDRPKEI AIREAVNYRV ERLEALKSDP HVEPAIQVLP VVTSDFKTGR TPWGVEMLSL TLLEAIAPAQ QLRLARFLRN LDARTLAASK IIDDYTFQMT TTQGLTAFLK SPVLKFIATL STGSPTLAYV LAEQIPVEQL PVVIGKLQMA YDLFSLLNPN NTQKNKFDLL ALWPLLLENP SSADRNAWAF GHALVEYWTQ NLTIAQLQER FKHYLNPNNQ
|
| |