Gene PCC7424_4275 details

Gene Information

• Locus tag: PCC7424_4275
• ID: 7108197
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 4743850
• End bp: 4745853
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643482498
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_002379512
• Protein GI: 218441183
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 62
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGATAA AAAATAAATG GCAACCGCCA CGTATTCCGC CCCTGGGTAG TCTTCTCCTC 
ATTTTGGCTG GGGTCTCCTT TGTTGCCTAT TTATTTTGGC CACGTTCCCA AAGTCTTTCT 
GATATTCCCA TCACCCCTTA CAGCACCTTT CTAGAACAGG TGGATGAAGG AGAGGTCAAA 
CAAGTCAAAA TAGCCGATAA TATTATTCTG TATAAACTCA AACCGCCGAT CGCTTCATTA 
CCCGATGACT TAATTCCCAA TAATCCTCTA CAAAGTTCCC AAAAAGGCAA TAACCCCTTT 
TATTCTTCTC CCAACGCCTC AGAAGAAACA AGCGAAAGTC AACCCGGACA GATATTCGCA 
ACCATTCCTC TCAATGACCC CCAATTACCT CAACTTTTGC GAGAAAAGGG AGTTAGTTTT 
GAAGCCGCCC CACCTCCTCA AAATGGCTGG TTAATGACTC TTTTAGCTTG GGTTGTTCCT 
CCTTTAATTT TGGTGGCGGC GATGCAGTAT TTTGTTAATC GTAATGATGA CACCCGTCAA 
TCCCTTTTAT TTAATAAAAA TAAAGCCAAG GTTTATGTAG AAGGAGAAAC AGAAAAAATT 
ACCTTTGCTA ATGTGGCCGG GGCAGAAGAA GCGAAAACCG AGTTAGTGGA AATTGTCGAA 
TTTCTCAAAG ATCCTGGGCG TTTTAGCCGG ATTGGGGCAC GTATCCCCAA AGGAGTGTTA 
TTAGTCGGCC CTCCAGGAAC GGGTAAAACC CTCTTAGCTA AAGCCGTAGC CGGAGAAGCC 
GGAGTCACTT TTTTTAGTAT ATCAGCCTCG GAATTTATCG AATTATTCGT CGGGACGGGG 
GCAGCTAGGG TTAGAGATTT ATTTAAACAG GCGAAAGAAC AAGCCCCTTG TATTATTTTT 
ATTGATGAAT TAGATGCCAT CGGCAAATCT CGCGCCAGTG GGGGGGCAAT GAGTGGGGGA 
AGTGATGAAC GAGAACAAAC CCTCAATCAA TTATTAACCG AGATGGATGG GTTTAGTGTG 
GGAGAGGCTA CCGTTATTGT TTTAGCCGCC ACCAACCGCC CAGAAACCCT CGATTCTGCC 
TTGTTACGTC CGGGTAGGTT TGACCGTCAA GTGTTGGTCG ATCGTCCGGA TTTAGCGGGG 
CGTATGGCTA TTTTAGAAGT ATATGCCCGG AAAATTCCCT TAGCTGACGA TGTGGATCTT 
AAAGCCCTCG CCACTCAAAC CCCAGGTTTT GCCGGGGCAG ACTTGGCTAA TTTAGTCAAT 
GAAGCCGCCC TCTTAGCTGC CCGTAAACAA CAGGAAAAAG TGTCTCAAGC AGATTTTAAA 
GAAGCGATCG AAAGAGTCGT CGCCGGGTTA GAAAAGAAAA GCCGGGTTCT CAACGAACAG 
GAGAAACGAA TTGTCGCTTA TCATGAAGTG GGTCATGCTT TAGTGGGCGC TGTGATGCCC 
GGTGGAGGCA AAGTTGAAAA AATTTCTATC GTTCCTAGGG GAATGTCTGC TTTAGGATAT 
ACGTTAAAAT TGCCTACAGA AGACCGTTTT TTAATGACAG ATGCGGAATT TCGTCAGCAA 
ATCGCTATGT TACTGGGAGG ACGTGCCGCA GAAGCGATTG TTTTTGGCAG TGTGACGAAT 
GGCGCTTCTG ATGATTTACG CCGGGCGACG GATATTGCAG AACGCATGGT AACGACTTAT 
GGGATGAGTA AGATACTCGG CCCCTTAGCT TATGATAAAG GTGCATCTGC TAACTTTTTG 
AGCAATGGGA ATGGTAGTAT TCGTCGTCCG GTAAGCGATG AAACGGCAAA AGCCATTGAT 
GAGGAGGTTA AACAGATTGT AGAAGGCGGT TATCAACAAG CTTTAGCAAT TTTAACTCAG 
AATCGGGAGT TGCTTGAGCG GATTTCTCAG CAGTTATTAC AAACTGAAGT GATTGAAGGG 
GAACAACTTC ATGGTCTGTT AAATCAGGCT TCTTTTGTAG ATGATTCTTG GCTTGATTCT 
AATAGTCATC TATCAAAGGT TTAG 

 

Protein sequence

MTIKNKWQPP RIPPLGSLLL ILAGVSFVAY LFWPRSQSLS DIPITPYSTF LEQVDEGEVK 
QVKIADNIIL YKLKPPIASL PDDLIPNNPL QSSQKGNNPF YSSPNASEET SESQPGQIFA 
TIPLNDPQLP QLLREKGVSF EAAPPPQNGW LMTLLAWVVP PLILVAAMQY FVNRNDDTRQ 
SLLFNKNKAK VYVEGETEKI TFANVAGAEE AKTELVEIVE FLKDPGRFSR IGARIPKGVL 
LVGPPGTGKT LLAKAVAGEA GVTFFSISAS EFIELFVGTG AARVRDLFKQ AKEQAPCIIF 
IDELDAIGKS RASGGAMSGG SDEREQTLNQ LLTEMDGFSV GEATVIVLAA TNRPETLDSA 
LLRPGRFDRQ VLVDRPDLAG RMAILEVYAR KIPLADDVDL KALATQTPGF AGADLANLVN 
EAALLAARKQ QEKVSQADFK EAIERVVAGL EKKSRVLNEQ EKRIVAYHEV GHALVGAVMP 
GGGKVEKISI VPRGMSALGY TLKLPTEDRF LMTDAEFRQQ IAMLLGGRAA EAIVFGSVTN 
GASDDLRRAT DIAERMVTTY GMSKILGPLA YDKGASANFL SNGNGSIRRP VSDETAKAID 
EEVKQIVEGG YQQALAILTQ NRELLERISQ QLLQTEVIEG EQLHGLLNQA SFVDDSWLDS 
NSHLSKV