| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3961 |
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| Symbol | |
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| ID | 7107367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 4392632 |
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| End bp | 4395802 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643482185 |
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| Product | Patatin |
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| Protein accession | YP_002379203 |
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| Protein GI | 218440874 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | [TIGR03607] patatin-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTA CTGCCACCAC TCCCTTAAAA AAACCTTCTT TTTGCCGTGA AATTCGCTTA
GGACTCGTCG TTTATGGAGG AGTATCTTTA GCAATTTACA TGAATGGTGT TTGCCGAGAA
TTTTACAATG CCATTCGTGG CCGAGGGATT TATAAATTAA TTAAAGCACT AACAGACTCA
GATATAGTAG TCGATATTGT TTCGGGAACT TCAGCCGGAG GAATTAATGG GATTTTGCTC
AGTTATGCCA TTGCCAATAG TGATCAGCAA AACCTAGCGG ACTTTAAAAA TTTTGGTCAA
ATTTGGCGAG ACAATGGAGA TATAGATCAG TTACTTCGAG AACCCAGTCC CAATAAACCG
AAAAATAATA TTGATTCAGT TTTAGATGGA GAAGGTTACT ATCAAGATCA GCTTAAAAAT
GCGTTAGACA AATCGGTCAC ACAAATTAAT CCTAATCCGG ATGATGAGTG GTACTCAGAC
TTTAAAGAAT TAGATTTATT TGTAACCGGC ACAGATGTAT TAGGTAAGGT ATCTAAAACT
TTTGATCAAA CTGGAAAAGA GATTGAAATC AAAGATCACA GAACCGTTTT TCATCTGAGA
TATCGTCAAG ATCGTATAGA ACAAATCGGC AATCCTTTTA GTCAAACTTC AATCAATCAT
AAAGCATTAG CTAAACTGTG TCGGATTACC TCTTGTTTTC CTGTCGCTTT TCCTGTTGTA
ACGGTTAAAC TAGACCCAAT TCCAGGAGAT CCTGACAGCG AAGTCGACCA AAAACTGGTC
AAATGGGGTC AATTAAACAA TCGTGAACTT CCCAATAGAG ACTTAACTGT CAATAAAACC
CATCAACTCT ATTTTATTGA TGGAGGAGTA TTAGATAATC GTCCTTTCAG CTATACGATT
AACGAAATTT TCTGTCGTAC TGCTTACCGT CCTGTTACTC GTAAACTCTT TTATATTGAT
CCTGCTCCTG ATAGTTTTCT CAATACTCCT CAGTTTAGAA ATATGGCCAA ACCCAATATT
GGGAAAGTTA TAACAGATTC TTTAATTAAT TTACCAAGAT ATGAGAGTAT TGGTACAGAT
TTAGCGAGAA TTCAAGAGCT TAATCAAAAA GTGACTTATT ATCGAATGCT TCGAGAAACC
CTGGAAAATG AAACTTTTGA TTCTCATTTT AATACTTCAG AAAACAGCAA CAATAAAGAA
TTATATTTAC GGTGTCGTTT AATCGCTTTA CGAGATCGAG TCATTAATCG GATCAGCAAC
ACGAAGCAAG TTTTTGTCCT TTCTCAAAAT AAGAAGAAAG TTTCTGAGTT AGAAACCGCT
ATTAAATTAA TTACTCAATT CCCTTCTGTT AATAAAAATT TTGATCATCA AGACGAAGAC
CTAAAACTAG AAGAAATTAG CAAAAAAACT CAAGATTTTG ATGTACAATT CTTCTTTAGA
AAATCTTATT TTTTGAATAG CAAAATCGGC TCTGTTATCG AGCTTTTTCA ACCCAAATTA
CAAGAAAATC AGGATTTTGT TTTCTATTGG AAATTACAAA GACTTGTTTA CATTATCAGT
TGGCACGCCG AACTGCTTAA GCTGATTCAA GTCACTATTA ATTTAACAAT GGAAAATATT
TTAAAAGCTA ATTTCGAGGG GGAATTGAAA AAGTTTTGGT ATCAAGAAAT ATTAGAAAAA
GAATCAGGAG AAAATACCTA TTTATTTCTC TTAGCCATTC AAAAAACTTT GTTAGTTGAT
AAAATTCACC AATCTTGGGA AAATTGGAAA CAAGCTATTC AAGAAATTCC TAAGAACAAA
CCAGAGTATT TACTCTACAC CAATAATGAA GAGAACAGCA AGTTTTTTGT CCGTCAAATT
GATCAAATCA CAACCGAAAT GACAAAAAAA GATGAAGAAA ATGAACTTCT GATCATGCAA
GAAATTGAAT ATCTTAGAAA AGAGGGATAT TCTTATAGTA AAACGGAGGA AAGTTTGTTA
ATTAAAGTCG ATCACTTTTT GCAAGAATTA CTCAAAGAAA GTAAGAGTGA GAGTAAAAAT
CAAAATGAGA TTGATATTTT TAATGATTTA ATTAATACTT TTGAAAATTT TGAATACATA
GATGCAAGGC TCTACCCTTG TGAGTTCTTA TCGGAAATTC AAACCAAAAG TACAATTGCT
CTGGAGAGAA TTTCTCCTAA TGATGCACAA TTTGGATTGG GAAAAGGTAA AACTCAAAAT
GATAAACTAG CTGGAGATCA ATTTAGAGCA TTTGGAGGAT TTTTTAAAAA ATCTTGGCGA
TCAAATGATA TTCTTTGGGG GAGATTAGAT GGCTTAAATC GGCTTGTTGA GTCTTTAGTC
GATCAAAATT TTGTGAGTCG ATTTCAAAAT GTCGTGACGC GAGAAATTGA CGGTCAAGAT
CATTGCAACA CTGCCGAAGC TTATATTAGT CAGTTAGTTG ATGACTGTAT TAAATATCCT
GAAATTAATC AAAAAGTCAA AGAGTGTTTA ATTGAAGTGT TTAATACAGG TAAAATTGAG
AATGATGAAA AATTCAATGA TTTATTAAAT AATATAGTGC TAGCAGGACA AAGAGAAATT
GTTGAGACAG ATTTACCAGT GGTTGTACAA GATGCCATTG AACAACAATT AAAATGGAAT
CAAGAATCTA AAGCAAATGC TCAAAAAGAA TCTAACTCTT CACCTGAATT TTTTGATCAG
ACAGTTAACC AATTTGCCGC CGTTGAACTC GCTAACCTCG CTGAACATTC TCTGAAGGCT
AATACAACTC CTCCTGATCT GGTAGAGTAT TTTAAAACTT CCTATCAAGT CGGTTCAGAA
ACATTACAGG AAGATATCCC TTCTGCGGTT CGTTCTCGCT GGATTAATAC ATCCGTGCTG
AATTTGCGAG ATATGTTAGT CACTTGGAAA GGAGAAAAGA TTCTTAAATC ACCGGTCTTT
TTTATTCTCG TTACTTTATT CAAAATCATT TACGGTGACT TAGGTAAATT ATTAAAACTT
AATGGGTTTT TAAAATTTAT TTTACCTGTC ATTTTTGTGG GTCTGGGGGT ATTTTGTTTC
ATTCAATTAA TAAAAATAGC CCCTCTTTTT ACTTTACTAC TGGTAGTCAG TTTACTGATT
TCTTTAGTTT TAATTGTACT AGGATTGGTC TCTAATTTAA TTTCCCGATA A
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| Protein sequence | MTSTATTPLK KPSFCREIRL GLVVYGGVSL AIYMNGVCRE FYNAIRGRGI YKLIKALTDS
DIVVDIVSGT SAGGINGILL SYAIANSDQQ NLADFKNFGQ IWRDNGDIDQ LLREPSPNKP
KNNIDSVLDG EGYYQDQLKN ALDKSVTQIN PNPDDEWYSD FKELDLFVTG TDVLGKVSKT
FDQTGKEIEI KDHRTVFHLR YRQDRIEQIG NPFSQTSINH KALAKLCRIT SCFPVAFPVV
TVKLDPIPGD PDSEVDQKLV KWGQLNNREL PNRDLTVNKT HQLYFIDGGV LDNRPFSYTI
NEIFCRTAYR PVTRKLFYID PAPDSFLNTP QFRNMAKPNI GKVITDSLIN LPRYESIGTD
LARIQELNQK VTYYRMLRET LENETFDSHF NTSENSNNKE LYLRCRLIAL RDRVINRISN
TKQVFVLSQN KKKVSELETA IKLITQFPSV NKNFDHQDED LKLEEISKKT QDFDVQFFFR
KSYFLNSKIG SVIELFQPKL QENQDFVFYW KLQRLVYIIS WHAELLKLIQ VTINLTMENI
LKANFEGELK KFWYQEILEK ESGENTYLFL LAIQKTLLVD KIHQSWENWK QAIQEIPKNK
PEYLLYTNNE ENSKFFVRQI DQITTEMTKK DEENELLIMQ EIEYLRKEGY SYSKTEESLL
IKVDHFLQEL LKESKSESKN QNEIDIFNDL INTFENFEYI DARLYPCEFL SEIQTKSTIA
LERISPNDAQ FGLGKGKTQN DKLAGDQFRA FGGFFKKSWR SNDILWGRLD GLNRLVESLV
DQNFVSRFQN VVTREIDGQD HCNTAEAYIS QLVDDCIKYP EINQKVKECL IEVFNTGKIE
NDEKFNDLLN NIVLAGQREI VETDLPVVVQ DAIEQQLKWN QESKANAQKE SNSSPEFFDQ
TVNQFAAVEL ANLAEHSLKA NTTPPDLVEY FKTSYQVGSE TLQEDIPSAV RSRWINTSVL
NLRDMLVTWK GEKILKSPVF FILVTLFKII YGDLGKLLKL NGFLKFILPV IFVGLGVFCF
IQLIKIAPLF TLLLVVSLLI SLVLIVLGLV SNLISR
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