| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3866 |
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| Symbol | |
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| ID | 7110070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 4301850 |
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| End bp | 4303892 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643482094 |
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| Product | NB-ARC domain protein |
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| Protein accession | YP_002379113 |
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| Protein GI | 218440784 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.641069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCGAG ATTTACCACA GTTACACCAG CAGTTACAAA CCAAGAACCA AGTAAGTATT
TTTGCACTTT TGGGTATTGG CGGCATCGGG AAGACGGAAT TAGCGCTGCA ATATGCTATA
AACTATCAAA ATGAGTATCC TGGCGGCTTG TGTTGGCTGG AGGCAAGAGC AGGGGATGTG
GGGTCACGGT TATTGAGTTT TGCGCGAATT CATCTCAATC TCTTGATTCC TGAAGGCTTA
ACTTTTGAAC AACAAGTAGG TTACTGTTGG CGCAACTGGG TAGAGGGGAA GGCTTTAATT
ATTTTCGATG ATGTGCAGGA ATACGGCGCT ATTAAGCCTT ATTTACCTCC ATCAACCCCA
AAGTTTAAAG TTTTACTCAC CAGTCGCAAG CGCTTAGGAA ATAATGTTTA TTCTCTCCCG
TTAGCGGTTC TTACTCCAGA GGCGGCATTA GAGTTATTAC AGTCCCTTGT TAGTGATGGA
CGCATTAGCG CAGAATTAGA ACAGGCACAA AGTTTATGTC AGCAGTTGGG ATATTTACCT
TTAGCGATAG AATTAGTCGG GCGCTATCTC TATAAGTCTC CGACAAGAAC TATTTCCCAA
GTGCGGCAGC AGTTAGACAG CTTACGGTTA GCGGCAGAAG CACTCTGCAA GCATCCCCAA
GATGACGAGG ATATGAACGC TAAGTTAGGG GTAGCGGCGG CTTTTGAGTT AAGTTGGACT
ATTTTATCTC CCGAAGCACA AAGATTAGGG TGTCGTTTGA GTTTGTTCGC TGCGACTCCG
TTTAAGTGGG AGTGGGTAGA GACTGCTTTT GGTGAAAATG ATGCGGCTGA ATTATACGGG
TTACATCTGC TGTCAGGGGG AGAAAATCGT CTGTTTTCGT TACATCCCCT GATTCGGGAA
TTTTTCGCTA TGAAGTTGTC GGAGTTGCCA GAAAGGGAAA TAGAGGAGGA TAAGTGCCCT
TTTTGTGGGG TAATGGTAGC ACAAGCAAAG GAAATACCTC AAACGCTGAC AGTAGATGAG
GTTGCTAGGG TTGGTGTTGT GATTCCTCAT CTAGAAGTAG CCGCAAATAA CCTAATGGAT
GTGGTTGAGG ATGAAGATAC AGGTTGGATT TTTTGGGGAC TGGGAAATTA TTATAAGGAA
CAAGGACTCT ATCAAGCGGC TGAACCTTGG TATGAAAATT GTTTGAAGGT AGTGAAAACC
CGTTTAGGAG ATAACCATCC CGATGTCGTC ACTTCCCTCA ACAATTTAGC AGTATTGTAC
GATTCTCAAG GCAGGTACAC AGAAGCCGAA CCTCTCTTAC AAAAAGCCTT AAAGCTAATG
CAACAACTTG ACGGAGAAAA CCATCCCCAT GTCGCCACTG CCCTCAACAA TTTAGCATTA
TTGTACAAAT CTCAAGGCAG GTACACAGAA GCCGAACCCC TCTATTTACA AGCTTTAAAA
CTGAGGCAAC AACTTTTAGG AGACAACCAT CTCAATGTCG CCATTACCCT CAACAATTTA
GCAGGATTGT ATGATTCTCA AGGCAGGTAC ACAGAAGCCG AACCCCTCTT ACAACAAGCC
TTAGCACTTT TGCAACAACT TGACGGAAAC AACCATCCCC ACGTCGCCAC TTCCCTCAAC
AATTTAGCAG GATTGTACCG TTCTCAAGGT AGGTACACAG AAGCCGAACT CCTCTATCAA
CAAGCTTTAA AAATAATGCA ACAACTGTAC GGAGACAACC ATCCCGATGT CGCCCAATCC
CTCAATAATT TAGCATTACT CTACAACGCA CAAGGTAATT ATACAGAAGC AGAAGCATTG
TCTCAACAAG CATTAACCAT TTTTCAGCAA ACATTAGGCA ATCAACACCC TCACACTCAA
GACGCTTTGC TGGCAGTAAA AATATCACGA ATGCAAATCC TTCTGCATTG CGATAGACAA
ACATTGGTTA GCCATCTACA AGCACTGGCA CAAAGAGCAG AAATTCCCGA ATTTAATCCA
GAAGTAGCAC TGGCTATGCT AGAGGCATTA GAGAACAATC CTGATTTATT GTCTGAACTG
TGA
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| Protein sequence | MGRDLPQLHQ QLQTKNQVSI FALLGIGGIG KTELALQYAI NYQNEYPGGL CWLEARAGDV
GSRLLSFARI HLNLLIPEGL TFEQQVGYCW RNWVEGKALI IFDDVQEYGA IKPYLPPSTP
KFKVLLTSRK RLGNNVYSLP LAVLTPEAAL ELLQSLVSDG RISAELEQAQ SLCQQLGYLP
LAIELVGRYL YKSPTRTISQ VRQQLDSLRL AAEALCKHPQ DDEDMNAKLG VAAAFELSWT
ILSPEAQRLG CRLSLFAATP FKWEWVETAF GENDAAELYG LHLLSGGENR LFSLHPLIRE
FFAMKLSELP EREIEEDKCP FCGVMVAQAK EIPQTLTVDE VARVGVVIPH LEVAANNLMD
VVEDEDTGWI FWGLGNYYKE QGLYQAAEPW YENCLKVVKT RLGDNHPDVV TSLNNLAVLY
DSQGRYTEAE PLLQKALKLM QQLDGENHPH VATALNNLAL LYKSQGRYTE AEPLYLQALK
LRQQLLGDNH LNVAITLNNL AGLYDSQGRY TEAEPLLQQA LALLQQLDGN NHPHVATSLN
NLAGLYRSQG RYTEAELLYQ QALKIMQQLY GDNHPDVAQS LNNLALLYNA QGNYTEAEAL
SQQALTIFQQ TLGNQHPHTQ DALLAVKISR MQILLHCDRQ TLVSHLQALA QRAEIPEFNP
EVALAMLEAL ENNPDLLSEL
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