Gene PCC7424_3717 details

Gene Information

• Locus tag: PCC7424_3717
• Symbol: rplF
• ID: 7110226
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 4143352
• End bp: 4143891
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 643481947
• Product: 50S ribosomal protein L6
• Protein accession: YP_002378966
• Protein GI: 218440637
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 68
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTCGTA TTGGCAAACG CCCTATCACC ATTCCCAATA AAGTTACTGT AAATATCGAT 
GGCTCTCATG TAGCGGTTAA AGGACCCAAA GGAGAGCTAC AAAGAACCCT GCCAACCTTA 
GTCATCGTTG AACAAGATGA GGGAGTTTTG CGAGTTGTTC GTCAAGATGA CTCTCGCACA 
GCCCGTCAAC GTCACGGACT ATGCCGTACC CTAGTCTCGA ACATGGTAGA AGGGGTATCT 
AAAGGTTTTG AAAAACGTCT AGAAATTCAA GGGGTAGGTT ACCGGGCGGC TGCTCAAGGT 
AGCAAACTCA CCCTTAATGT CGGCTACAGT AAACCCGTTG AAATGGATAT GCCCTCCGGA 
ATTGGAGTGG CCGTCGAAAA AAATACGGAA ATTACGATCA CCGGCATAGA CAAAGAAATC 
GTCGGTAATG TAGCGGCCAA AATTCGCGCC GTGCGTCCTC CTGAACCTTA CAAAGGTAAA 
GGAATTCGCT ATAAAGGTGA AGTCGTTAGA CGTAAAGCGG GTAAAACAGG TAAGAAATAA 

 

Protein sequence

MSRIGKRPIT IPNKVTVNID GSHVAVKGPK GELQRTLPTL VIVEQDEGVL RVVRQDDSRT 
ARQRHGLCRT LVSNMVEGVS KGFEKRLEIQ GVGYRAAAQG SKLTLNVGYS KPVEMDMPSG 
IGVAVEKNTE ITITGIDKEI VGNVAAKIRA VRPPEPYKGK GIRYKGEVVR RKAGKTGKK