Gene PCC7424_3575 details

Gene Information

• Locus tag: PCC7424_3575
• ID: 7112188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 3979157
• End bp: 3981007
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 643481813
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_002378833
• Protein GI: 218440504
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 54
• Fosmid unclonability p-value: 0.873251
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAAAAATA ACAATAATAA AAAATGGCGC AATGCAGGGC TATATGCACT CTTAGCAATT 
GTTGTCATAG CTTTAGCAAC AGCATTTTTA GACCAACAAC CTCAACCGAG AACCACCTGG 
AAATATAGTG AATTTCTCGA TCAAGTGAGA CAAGGTAAGG TTGAAAGAGT ACAACTGAGT 
GCCGATCGCA GCGAAGCGAG AGTTCCCACT CAAGACGGTC AATATGTTAC CGTAAATCTC 
CCTAATGACC CTCAATTAGT GAATATTTTG GCCGACAACG GAGTCGATAT AGTCGTTCGT 
CCTCAAACTA ATGACGGAAT GTGGTTTCGT GCCCTCAGTA GCCTATTCTT CCCAATTTTA 
TTATTAGTCG GTTTATTTTT CCTTCTCAGA CGGGCACAAA GCGGCCCCGG TTCTCAAGCG 
ATGAACTTTG GGAAGTCTCG CGCCAGAGTC CAAATGGAAC CCCAAACTCA AGTCACTTTT 
GGGGATGTGG CCGGCATTGA ACAAGCTAAA TTAGAACTCG CTGAAGTGGT AGACTTCCTC 
AAAAATGCCG ATCGCTTTAC CGCTATTGGG GCAAAAATTC CCAAAGGAGT TTTATTAGTC 
GGCCCTCCAG GAACGGGTAA AACCCTGTTA GCGAGAGCCG TTGCCGGAGA AGCCGGAGTT 
CCTTTCTTCT CCATCTCTGG TTCTGAATTC GTAGAAATGT TTGTCGGGGT CGGAGCTTCC 
AGAGTTAGAG ACTTGTTTGA ACAAGCGAAA GCTAATGCTC CCTGTATCGT ATTTATTGAT 
GAAATTGACG CAGTCGGTCG TCAACGGGGT GCCGGTTTAG GGGGTGGTAA CGATGAACGG 
GAACAAACCT TAAACCAACT CCTCACCGAA ATGGACGGGT TTGAAGGGAA TACCGGTATT 
ATTATTATCG CCGCCACTAA CCGTCCTGAT GTGTTAGATG CAGCCTTATT ACGTCCCGGA 
CGTTTTGATC GTCAAGTTGT TGTTGATCGT CCTGACTATG CCGGACGACA AGAAATTCTT 
AAAGTTCACG CTCGTGGGAA AACCTTAGCT CCGGATGTGG ATCTCGATAA AATTGCCCGT 
CGGACTCCTG GGTTTACCGG TGCAGATCTG TCTAACCTAT TGAATGAAGC CGCTATTTTA 
GCCGCTCGTC GTAACCTGAC AGAAATTTCG ATGGATGAAG TCAATGATGC TATTGACCGA 
GTTCTGGCCG GGCCTGAGAA GAAAAGCCGT GTCATGAGCG AAAAACGGAA AACCCTCGTC 
GCTTATCACG AAGCCGGTCA CGCTTTAGTC GGCGCATTAA TGCCAGACTA TGATCCGGTA 
CAAAAAATTA GTATTATTCC TCGGGGTCGT GCCGGTGGGT TAACTTGGTT TACCCCCAGT 
GAAGACCGGA TGGAGTCGGG GTTATTTTCT CGCTCTTACC TGCAAAATCA AATGGCCGTT 
GCCTTAGGGG GTCGTTTAGC TGAAGAAATT ATCTTCGGGG AAGAAGAAGT CACCACCGGC 
GCGTCTAATG ACTTACAACA AGTCGCGCGA GTAGCTCGTC AAATGGTAAC TCGGTTTGGG 
ATGAGCGATC GCTTAGGCCC TGTGGCTTTA GGTCGTCAAA ACGGGAATGT TTTCTTAGGA 
CGGGAAATTG CTTCAGACCG AGATTTTTCT GATGAAACGG CAGCCGCGAT CGATGAAGAG 
GTAAGAAACT TAGTCGATCA AGCCTATCGT CGAGCTAAAG AGGTTTTAAT GAATAACCGT 
CCTATTCTCG ATCAATTAGC CTCTATGCTC ATTGAGAAAG AAACCGTAGA CGCAGAAGAA 
TTACAAGACA TCTTGGCTAA CAATGATGTG AAAATGGCCG CTTTAACTTA A 

 

Protein sequence

MKNNNNKKWR NAGLYALLAI VVIALATAFL DQQPQPRTTW KYSEFLDQVR QGKVERVQLS 
ADRSEARVPT QDGQYVTVNL PNDPQLVNIL ADNGVDIVVR PQTNDGMWFR ALSSLFFPIL 
LLVGLFFLLR RAQSGPGSQA MNFGKSRARV QMEPQTQVTF GDVAGIEQAK LELAEVVDFL 
KNADRFTAIG AKIPKGVLLV GPPGTGKTLL ARAVAGEAGV PFFSISGSEF VEMFVGVGAS 
RVRDLFEQAK ANAPCIVFID EIDAVGRQRG AGLGGGNDER EQTLNQLLTE MDGFEGNTGI 
IIIAATNRPD VLDAALLRPG RFDRQVVVDR PDYAGRQEIL KVHARGKTLA PDVDLDKIAR 
RTPGFTGADL SNLLNEAAIL AARRNLTEIS MDEVNDAIDR VLAGPEKKSR VMSEKRKTLV 
AYHEAGHALV GALMPDYDPV QKISIIPRGR AGGLTWFTPS EDRMESGLFS RSYLQNQMAV 
ALGGRLAEEI IFGEEEVTTG ASNDLQQVAR VARQMVTRFG MSDRLGPVAL GRQNGNVFLG 
REIASDRDFS DETAAAIDEE VRNLVDQAYR RAKEVLMNNR PILDQLASML IEKETVDAEE 
LQDILANNDV KMAALT