| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3518 |
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| Symbol | |
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| ID | 7107141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 3908953 |
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| End bp | 3910605 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643481757 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002378778 |
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| Protein GI | 218440449 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCT CTTCGTTTCA AAAAGATGGT GACAATTTCC CCACAGCCAG AATCGAGAAT
TTACAGACTT TATCCTCTCA AAAAGAATTA AAAATTAGTT CCTCTGAGAG TGGTTTTATT
AAAGGGGGTA CAGCAGGGTC AGTTGCTCTT GAACATCCCA CTTCTTTCCC AAAAACAAAA
ACTAACAAGG TACTAACTAA ACCAGAAAAG CCAATTAGTT GGTCAATGCC AGTACAGGCA
ATGTTAGATC AACCTCCTGC TACTTTGCCT CAACGGTTAA TTTATGGGGG TATAGCCTTT
TGTTTAATCT TTGGCACTTG GGCTTGGTTT GGAACAATTG AAGAAGTGGG TCATGCTTCT
GGAAAATTAA TCCCCAAAGG AGAAACCTAC AAAATAGAAC CTCTAGACAT CGGTAAAGTC
AGCAGAATTG CTGTAAAAGA GGGAGATACC GTAACCGCCG GCCAAGTTTT AGTCGAACTC
GATAGACAAC TTGAAGAAAA GGAAATTGAG CGACTTGAAC AACTGCTAAT TAATTATCAA
ATGGAATTAG CTCAAAAGCA AAATTTATTA GAGAAAATTT CTTTAGAAGC TCAAACTTAT
CAAGCAATTT CTCAAGCTCA AGAGAATGAA CAACGAGCAG CGATCGCTCA AGCCAAAGAA
AAAATTAAGA CAACCCAAGA AATCTTATTA TTACAACAAC GCCAATACTC AGCTTATCAA
ACTCGGCAAG ATTATTTACA ACCCCTTTCA GGTACAGCCC AAGAACGACT TGAAGAACTA
GAAAAAGAAC TGCTCGAACA TCAAAAACGG ATAGAAAAGT TACAAAGTTT GGTAGAAGAG
GGTGCAGTTT CTCAGGAATA TGTCTTTCAA GCTGAACAAG CGATGAGAGC GACAAAACAG
CAAATTCTTC AAAGTCAATT ACAAGAAGGA AATAATGTTA AAGAACAACT TTTTCAGGCG
CAACAATCTT TGCGAGATTT ACAGACAAAT ATTACTCAAA AACAAGGAGA ACTCAACACC
GCTTTTAAAG AAGCTGAACG CTTAGAGTCA GAATTAACTT CAAAACAAGC TCAAGCCCAA
CAAACTCAAC TGCAATATCA GCAACAAAAG CAAAAATTAG CCCTAGAAAT TACCCAAATA
CAGGGGAAAA TTACCGAAAC CCAAAATTTA CTCGTCACCG CTAAAACCAA ACTTCAATAT
AAATATCTCA AAGCTCCTGT AGATGGCGTT GTTTTATCCC TGAATATCCA AAATACGGGT
AAGGTTGTTG AAACGGGAAA TACTATTGCT GAAATTGCTC CAGAGGGTGT TCCTTTAGAA
CTTTCTGCCA CTTTAGTTAA TCGTGAGGCT GGTTTTGTAC AGAAAGGGAT GCCAGTACAA
ATTAAGTTTG ATGCTTATCC CTATCAAGAT TATGGAATTA TTTCAGGAAA AGTTAGTAGT
ATTTCTGAGG ATGCTAAAAC TGATGAAGAC TTAGGAGAAG TTTATCAGGT CAAAGTCGAA
TTAGAGCAAA ATTATATCCA AGAAAATCAG CAACCGATTC AATTTAAAGC CGGACAGACT
GCCTCGGCTG ATATTATTAT CCGTCGTCGC CGAATTATTG ATATTTTACT AGATCCCATC
AAACAATTAC AAAAAGATGG AATAAAGCTG TAA
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| Protein sequence | MTSSSFQKDG DNFPTARIEN LQTLSSQKEL KISSSESGFI KGGTAGSVAL EHPTSFPKTK
TNKVLTKPEK PISWSMPVQA MLDQPPATLP QRLIYGGIAF CLIFGTWAWF GTIEEVGHAS
GKLIPKGETY KIEPLDIGKV SRIAVKEGDT VTAGQVLVEL DRQLEEKEIE RLEQLLINYQ
MELAQKQNLL EKISLEAQTY QAISQAQENE QRAAIAQAKE KIKTTQEILL LQQRQYSAYQ
TRQDYLQPLS GTAQERLEEL EKELLEHQKR IEKLQSLVEE GAVSQEYVFQ AEQAMRATKQ
QILQSQLQEG NNVKEQLFQA QQSLRDLQTN ITQKQGELNT AFKEAERLES ELTSKQAQAQ
QTQLQYQQQK QKLALEITQI QGKITETQNL LVTAKTKLQY KYLKAPVDGV VLSLNIQNTG
KVVETGNTIA EIAPEGVPLE LSATLVNREA GFVQKGMPVQ IKFDAYPYQD YGIISGKVSS
ISEDAKTDED LGEVYQVKVE LEQNYIQENQ QPIQFKAGQT ASADIIIRRR RIIDILLDPI
KQLQKDGIKL
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