Gene PCC7424_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3490 
Symbol 
ID7107113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3884518 
End bp3885504 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content44% 
IMG OID643481729 
Product30S ribosomal protein S1 
Protein accessionYP_002378750 
Protein GI218440421 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTA CTAAAAACCT ATCAACTAAA ACTATTGGAT TTACTCACGA AGATTTTGAG 
AAGCTTCTCG ATCAATATGA CTATCATTTT AGTCCTGGGG ATATTGTCGC CGGGACGGTG
TTTAGTATGG AGCCAAGGGG GGCCCTGATC GATATTGGAG CAAAAACAGC CGCTTATATC
CCCATTCAAG AAATGTCAAT TAACCGGGTT GACGATCCTA GCGAAGTGCT GCAAGCCAAC
GAAACCCGCG AATTTTTTAT TCTAACGGAT GAAAATGAAG ATGGACAGTT AACCCTGTCT
ATTCGTCGTA TTGAGTATAT GCGAGCTTGG GAAAGAGTCC GTCAGCTACA AACCGAAGAC
GCGACCGTTC GTTCTAGTGT GTTTGCCACG AACCGAGGTG GGGCGCTCGT GAGAATAGAA
GGGTTAAGAG GATTTATTCC GGGTTCTCAT ATTAGCACAA GGGAAGCCAA AGAAGATTTA
GTTGGGCAAG ACCTCCCCTT AAAATTCCTA GAGGTAGATG AAGACCGTAA CCGCCTTGTT
TTAAGCCATC GTCGTGCTTT AGTTGAGCGT AAGATGAATG GTTTAGAAGT GGGTCAAGTG
GTGATTGGTT CAGTCCGGGG AATCAAACCT TATGGGGCAT TTATTGACAT CGGCGGTGTC
AGTGGACTGT TACACATCTC GGAAATTTCC CACGATCATA TTGATACGCC TCACAGTGTC
TTTAATGTTA ATGATGAGTT GAAAGTGATG ATCATTGACT TAGATGCAGA AAGAGGACGC
ATTTCTTTAT CGACTAAACA GTTGGAACCT GAAGCCGGGG ATATGTTGAA AAACCGGGAT
TTAGTCTTTG AAAAAGCTGA AGAAATGGCG GCTAAATATC GGGAAAAAAT GAGAGCAGAA
GCAGAAGGTA CGCCGATTGA AGAAGAAATC GATGCTCCTT CCGCATTAGA TGAAGAAGAG
TTAGCTCTGG CAGCAGCAGA GGAATAA
 
Protein sequence
MTTTKNLSTK TIGFTHEDFE KLLDQYDYHF SPGDIVAGTV FSMEPRGALI DIGAKTAAYI 
PIQEMSINRV DDPSEVLQAN ETREFFILTD ENEDGQLTLS IRRIEYMRAW ERVRQLQTED
ATVRSSVFAT NRGGALVRIE GLRGFIPGSH ISTREAKEDL VGQDLPLKFL EVDEDRNRLV
LSHRRALVER KMNGLEVGQV VIGSVRGIKP YGAFIDIGGV SGLLHISEIS HDHIDTPHSV
FNVNDELKVM IIDLDAERGR ISLSTKQLEP EAGDMLKNRD LVFEKAEEMA AKYREKMRAE
AEGTPIEEEI DAPSALDEEE LALAAAEE