Gene PCC7424_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3388 
Symbol 
ID7112003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3783584 
End bp3786391 
Gene Length2808 bp 
Protein Length935 aa 
Translation table11 
GC content44% 
IMG OID643481630 
ProductATPase, P-type (transporting), HAD superfamily, subfamily IC 
Protein accessionYP_002378651 
Protein GI218440322 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.027137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTC CTACCACATC TTCTTTAGCT TCTGCCACCT TTCCCAACAC TGCCCAACCT 
TGGCATACTC AACCCTCAAG CCAAGCCTTA GAATTGCTCC AAAGTGACCC CGAACAAGGA
TTACCAGAAT CCCAAATTAC TCAGCGACAG CAGTATTATG GCGCGAATGA ACTCAAAGAA
ACCGGCGGTC GTAGTCCCTT ACAAATTTTG TGGGAACAAT TTACTAATAT TATGTTAGTA
ATGCTGATTG CTGTTGCCGT TGTTTCAGCC GTTTTAGACT TAAAAAATGG CACATTCCCC
AAAGATGCGA TCGCCATATT TTTAATCGTA ATTTTAAATG GAATTTTAGG CTATTTACAA
GAAAGTCGCG CCGAAAAAGC CCTAGCCGCC CTAAAAAATC TCTCTTCTCC TAAAGTCCGA
GTCATTCGCA ACGGCAAAAC CGAAGAAATT TCCGCTAAAG ACTTAGTTCC AGGGGATATT
ATGCTCCTTG AAGCCGGAGT TAGTATAGCC GCCGATGGTC GTCTTCTAGA AGCCCAAAAT
TTACAAGTCA AAGAATCTGC CTTAACCGGG GAAGCAGAAG GCGTTAATAA ACAAGCAGAG
GTGATTTTAA ATGAAGATGC CCCTTTAGGC GATCGCATTA ATCTTGTCTT TCAAGGGACA
GAAGTGATCC AAGGACGGGC AAAAGTTTTA GTCTGTAAAA CGGGGATGGA CACAGAAATT
GGGCATATTG CCGCCATGCT TCAGTCGGTT GAAAGTGAAC CGACTCCCCT ACAACAACGG
ATGTCTCAAC TGGGCAATGT GTTAGTCAGT AGCTCCTTAA TTTTAGTGGC GATCGTCGTC
ATTGGGGGAG TTTTGCGGAC AGGATGGGGG TTATTTGAAC AACTGTTAGA AGTGTCCCTA
AGTATGGCGG TAGCGGTTGT TCCCGAAGGG TTGCCGGCAG TTGTCACCGT AACCCTAGCC
ATCGGTACTC AGCGAATGGT ACGCCGGAAT GCCCTCATTC GTAAATTGCC GGCGGTAGAA
ACCCTCGGAT CAGTAACAAC GATTTGTTCT GACAAAACCG GGACTTTAAC TCAGAATAAA
ATGGTGGTGC AACAAGTCCA AACCGGATGT CAAAGTTTTC AAGTGACTGG GGAAGGTTAC
GCCCCCATAG GAGAATTTAT TCCAGACGAA GAAAGATATA AGACGGAGTA TCAAGACGTT
CAACTGCTTT TAAGGGCTTG TGTCTTATGT AATGATGCTC TTTTGCAAGA AAAACAAGGC
TCATGGGAAA TTATCGGAGA TCCCACCGAA GGCGCTTTAC TGAGTTTAGC CGGAAAAGCC
GGGATTTATC AAGAAGCCCT GACTCCATCC CTCCCCAGAG TCGGGGAAAT TCCCTTTTCT
TCTGAGAGAA AACGGATGTC AGTTGTCGTT GAAGGGGTAA TGTTACCAGA ACAAGAGCCA
CCCTACACCA TGTTTACTAA AGGCTCTCCA GAATTAATTT TAGAACGATG TACCCACGTT
ATTAACGGCG ATCGTCCTCA ACCCTTAACC TCCGAGGAAC GGGAAAACAT ATTATTTCAA
AATGATCAAA TGGCCATGCA AGGACTGCGG GTATTAGGAT TTGCCTGTAG AGCGATAGAA
GAAATCCCTA GCCTTGAAAG CGAAGAAATC GCCGAACAAC AGTTAATTTG GCTGGGATTA
GTGGGAATGT TAGACGCGCC CCGAAAAGAG GTTAAAGGGG CGGTTTTACG TTGCCGAGAA
GCCGGTATTC GTGCGATTAT GATCACCGGA GATCATCAAC TCACCGCACA AGCGATCGCT
TATGATTTAG GAATAGCCCA ACCGGGAGAT CAAATTCTCA CAGGGAGAGA ATTAGAAAGA
TTCAATCAAT CAGAATTAGA AGAAAAAGTA GAACAAGTGA GTGTCTATGC CAGAGTATCA
CCGGAGCATA AACTGAGAAT TGTTCGAGCC TTACAAAATC GGGGTAAATT TGTGGCGATG
ACTGGGGATG GAGTCAATGA TGCTCCTGCC CTCAAACAAG CGGATATTGG GATAGCGATG
GGAATTACAG GGACAGATGT CAGTAAAGAA GCCAGTGATA TGATTTTGTT AGATGATAAC
TTTGCCACTA TTGTGGCCGC CACAGAAGAG GGAAGAGTTG TCTATAGTAA TATTCGTCGT
TTTATTAAAT ATATTCTCGG CAGTAATATT GGAGAAGTAT TAGTCATTGC CGCGTCTCCC
CTGTTAGGGT TAGGGGGCGT TCCTTTGTCT CCCTTACAAA TTTTGTGGAT GAATTTAGTG
ACGGATGGGT TACCGGCTTT AGCGTTAGCA ATGGAACCGG CTGAACCGAA TGTTATGAAA
CGTCCTCCCT TCAGCCCCAG AGAGAGTATT TTTGCTAGGG GATTAGGGTT ATATATGGTT
CGTATCGGTA TTATTTTTGC GATTTTAACT ATTGGGTTAA TGGTATGGGC GTATAATCAT
GCTCAGGCTT CCGGAGACCC TCAACGTTGG AAAACGATGG TTTTTACTAC TCTTTGTTTA
GCACAAATGG GTCATGCTTT AGCGGTACGC TCTGATAACC GACTGACTAT ACAATTAAAT
CCGATGTCGA ATCCTTATGT TTTAGGAGCG ATTACCCTGA CTACTTTACT TCAATTGTTA
CTCATTTATT TTGCTCCCTT GAGAAACTTT TTTGGAACTC ACTGGCTCAG TTTTACAGAA
TTGGCGATTT GTTTCGGGTT TAGTGCTTTA ATGTTTGTTT GGATTGAAAT AGAAAAGATC
ATTGTTAATG CTTTTTTCGT TTCCCAGAAA ACCTCAAGTA AGCTCTAA
 
Protein sequence
MSFPTTSSLA SATFPNTAQP WHTQPSSQAL ELLQSDPEQG LPESQITQRQ QYYGANELKE 
TGGRSPLQIL WEQFTNIMLV MLIAVAVVSA VLDLKNGTFP KDAIAIFLIV ILNGILGYLQ
ESRAEKALAA LKNLSSPKVR VIRNGKTEEI SAKDLVPGDI MLLEAGVSIA ADGRLLEAQN
LQVKESALTG EAEGVNKQAE VILNEDAPLG DRINLVFQGT EVIQGRAKVL VCKTGMDTEI
GHIAAMLQSV ESEPTPLQQR MSQLGNVLVS SSLILVAIVV IGGVLRTGWG LFEQLLEVSL
SMAVAVVPEG LPAVVTVTLA IGTQRMVRRN ALIRKLPAVE TLGSVTTICS DKTGTLTQNK
MVVQQVQTGC QSFQVTGEGY APIGEFIPDE ERYKTEYQDV QLLLRACVLC NDALLQEKQG
SWEIIGDPTE GALLSLAGKA GIYQEALTPS LPRVGEIPFS SERKRMSVVV EGVMLPEQEP
PYTMFTKGSP ELILERCTHV INGDRPQPLT SEERENILFQ NDQMAMQGLR VLGFACRAIE
EIPSLESEEI AEQQLIWLGL VGMLDAPRKE VKGAVLRCRE AGIRAIMITG DHQLTAQAIA
YDLGIAQPGD QILTGRELER FNQSELEEKV EQVSVYARVS PEHKLRIVRA LQNRGKFVAM
TGDGVNDAPA LKQADIGIAM GITGTDVSKE ASDMILLDDN FATIVAATEE GRVVYSNIRR
FIKYILGSNI GEVLVIAASP LLGLGGVPLS PLQILWMNLV TDGLPALALA MEPAEPNVMK
RPPFSPRESI FARGLGLYMV RIGIIFAILT IGLMVWAYNH AQASGDPQRW KTMVFTTLCL
AQMGHALAVR SDNRLTIQLN PMSNPYVLGA ITLTTLLQLL LIYFAPLRNF FGTHWLSFTE
LAICFGFSAL MFVWIEIEKI IVNAFFVSQK TSSKL