Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3296 |
Symbol | |
ID | 7111905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 3692049 |
End bp | 3692654 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643481540 |
Product | RNA polymerase sigma factor |
Protein accession | YP_002378563 |
Protein GI | 218440234 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAAAC AAGCAATAGT GTTGGCTGAT AATGTAGCTT GCACCCCAGA GAGTGAATTG ATAGTCCGAT GTCAGAGAGG CGATCGCACG GCCTTTCATC AATTGTATCG ACGCTATCAG CAAAAGGTAA GCTCAACTTT ATACCAACTC TGTGGGCGAG AAATGTTAGA GGATCTCGTC CAAGAAGTCT TTATTAGAGT TTGGAAAGGA CTACCCAAAT TACGTCAACC CTCCTACTTT TCCACCTGGT TATATCGTAT CTGTTGGAAT GTAGCGGTGG ATGGACGGCG ACAATTTGCC AAACGAAAAC AGGAAAAAAG AGAAACATCG ACGGATAAGG ATGATTTATC CAGTTTAGAA ACCCTATTTC GTTCCCAAGA TACTCCAGAT TTAATGCAGT TACACTATCA AGATCTAGTC CAACGGGGAC TACAAACCCT CAGTTTAGAC CATCGAGCGG TAATTGTCTT ACATGACTTA GAAGATATTC CCCAAAAAGA AATCGCTCAA ATCTTACAAC TTCCCGTCGG TACGGTTAAA TCTCGCTTGC ATTATGCTCG CAATGCTATT AAAAAATTTT TGCAGCAAGA AGGAGTATTA TCATGA
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Protein sequence | MRKQAIVLAD NVACTPESEL IVRCQRGDRT AFHQLYRRYQ QKVSSTLYQL CGREMLEDLV QEVFIRVWKG LPKLRQPSYF STWLYRICWN VAVDGRRQFA KRKQEKRETS TDKDDLSSLE TLFRSQDTPD LMQLHYQDLV QRGLQTLSLD HRAVIVLHDL EDIPQKEIAQ ILQLPVGTVK SRLHYARNAI KKFLQQEGVL S
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