Gene PCC7424_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3230 
Symbol 
ID7107707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3612022 
End bp3615573 
Gene Length3552 bp 
Protein Length1183 aa 
Translation table11 
GC content40% 
IMG OID643481474 
Productmethionine synthase 
Protein accessionYP_002378498 
Protein GI218440169 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCC CGTTTCTTAA CCGTCTTCAT AGTCCAGAAC GTCCCGTCCT CGTTTTTGAT 
GGGGCAATGG GAACTTCTCT TCAGACTCAA AATTTAACGG CAGAAGATTT TGGCGGTCTT
CAATATGAAG GATGTAATGA GTATTTGGTA CACACCAAAC CGGAAGCGGT AGAAAAGGTT
CATCGGGGTT ATCTCGAAGC CGGGGCCGAT GTGATAGAAA CCGATACCTT CGGAGGGACT
TCTATTGTTT TGGCGGAATA TGATTTAGCC GATAAAGCTT ATTATTTGAA TAAAACGGCG
GCACAATTAG CCAAACGAGT TGCCCAAGAA TATTCCACCC CCCAAAAGCC CCGTTTTGTC
GCCGGTTCTA TGGGGCCAGG AACGAAATTA CCGACCTTGG GGCATATTGA TTTTGATACC
CTTAAAAATG CTTATATCGA ACAAGCAGAA GGTCTTTATG ATGGGGGGGC AGATTTATTT
ATTGTTGAAA CCTGTCAGGA TGTTTTACAA ATTAAAGCCG CTTTAAATGC AATAGAAGAG
GTTTTTCAAA AAAAAGGGAA TCGTATTCCT ATTATGGTGT CTATTACGAT GGAAGTGATG
GGCACGATGT TAATTGGGAC GGAAATCGGC GCAGCTTTGA CGATTTTAGA ACCCTATAAT
ATTGATATTT TAGGGCTAAA TTGTGCTACT GGTCCCGATC AAATGAAAGA ACATATAAAA
TATCTTTCGG AAAATTCACC TTTTATTATT TCTTGTATTC CTAATGCCGG CTTACCGGAA
AATGTGGGAG GACAGGCACA TTATCGATTA ACTCCCCTAG AATTAAGAAT GGCATTAATG
CACTTTGTGG AAGATTTAGG AGTGCAAATT ATTGGGGGTT GTTGTGGGAC AAGGGCAGAT
CATATTAAAG CCTTAGCAGA AATTACCAAA GATCTCAAAC CTAAAGAACG TCATCCCCAT
TATGAACCTT CGGCAGCTTC TATCTATAGT CCTCAACCCT ATATTCAAGA TAATTCTTTC
CTCATTGTCG GAGAAAGACT TAATGCAAGT GGGTCGAAAA AATGCCGAGA GTTATTAAAT
AAAGAAGACT GGGATAGTTT AGTCTCTATG GCTAAATCTC AGGTCAAAGA AGGGGCACAT
ATTTTAGATG TGAATGTGGA TTATGTGGGA CGAGATGGGG TCAAAGACAT GAAAGAATTG
GCCTCTCGTC TGGTAAATAA TGTGACTCTG CCTTTAATGT TAGACTCCAC CGAATGGGAA
AAAATGGAGG CAGGATTAAA AGTTGTCGGC GGGAAATGTA TTCTCAATTC GACTAACTAT
GAAGATGGAG AACCTCGGTT TTATCAAGTC CTTGACTTAG CCAAAAAATA CGGGGCAGGA
GTTGTTGTTG GGACGATAGA TGAAGAGGGA ATGGCACGCA CCGCAGAGAA AAAATTTGCC
ATAGCTAAAC GGGCTTATGA AGCAGCCGTT AATTATGGCC TTCCTCCTGA AGAAATATTT
TTTGATCCCT TGGCGTTACC GATTTCTACG GGGATAGAAG AGGATAGAAA TAACGGAAAA
GCAACGATAG AAGCGATTAA ACGCATTCGA GATGAATTAC CCAAATGTCA TATTTTACTT
GGGGTTTCTA ACATCTCTTT CGGGTTAAAT CCAGCCGCTA GACAGGTGTT AAACTCGGTC
TTTCTACATG AGTGTATGGG CGTGGGGTTA GATTCGGCTA TTGTTAGCGC GAGTAAGATT
TTACCCTTGG CTAAAATTGA CCCAGAACAT CAAGAAATCT GTCGAGATTT AATTTATGAC
CGTCGCCGAT TTGAGGGGGA TGTGTGTGTT TATGATCCTT TGACGAAGTT AACGGAAGTG
TTTGCCGGAA AAACCACTAA GAAGACTGCT TCAGATAAGG CTAGTTTACC GATAGAAGAA
CGACTCAAAC AGCATATTAT TGATGGGGAA AGAATCGGAT TAGATGATGC TTTAGCCGAA
GCCTTGAAAC AGTATCCGCC TCTAGAGATT ATTAATACTT TCCTGTTAGA TGGAATGAAA
GTAGTCGGTG AGTTATTTGG GTCGGGACAA ATGCAACTGC CTTTTGTGTT ACAATCTGCC
CAAACCATGA AGGCCGCAGT GGCTTATTTA GAACCGTTCA TGGAGAAGGA AGAAGGGAAC
GGAAATACAA AAGGAAAATT TATTATTGCT ACGGTTAAAG GGGATGTTCA TGATATTGGT
AAAAATTTGG TCGATATTAT TTTGTCTAAT AATGGCTATA CGGTGATTAA TTTAGGCATT
AAACAACCGG TTGAGAATAT TATTCAAGCC TATCAAGAAC ATCAGGCTGA TTGTATCGCT
ATGAGTGGTT TGTTGGTCAA ATCAACGGCT TTTATGAAGG AGAATTTAGA GGTATTTAAT
GAACGAGGAA TTACGGTTCC GGTGATTTTG GGAGGTGCAG CTTTAACTCC TAAGTTTGTC
CATGAAGATT GTCAGAATAC TTATAAGGGT CAGGTGATTT ATGGAAAGGA TGCTTTCTCA
GATTTGCATT TTATGGATAA ATTAATGCCG GCAAAAGTTG AGGGAAAATG GGATGATTTA
AAGGGGTTTT TAGATGAGTC CGCAGATGAA CGCAGATTAA CACGGATGGT TGAGTCTGTG
CGTGTTATAG ATAAGGATGA TGAGGATGGA AAGATTAGTG AACCGGTAAT TATTGATACT
CGTCGTTCTG ATGAGGTTAG TATAGATATT GACCGTCCTA TTCCTCCTTT CTGGGGGACG
AAGATTTTAA CTCCTGATGA GATTGTTTTA GATGAGGTTT TCAAATATTT AGATTTACAA
GCGTTGTTTG TGGGACAATG GCAATTCCGC AAACCGAAAG ACCAGTCACG GGAAGAATAC
GACCAATTTT TAACGGATAC GGTTCATCCA ATTTTACAAG GGTGGAAACA GCGTATTCTT
GAGGAAAAGT TGTTACATCC TACGGTCATT TATGGGTATT TTCCTTGTCA GTCTGAGGGG
AATTCTTTAC TGGTTTATGA CCCAGAAATT TGGCAACAGT CAGAAAAATT AGACCTCATT
TGGACATTAG ATTTTCCTCG ACAAAAGTCA AACCGCCGGT TGTGTATTGC TGATTTCTTT
GCGCCGAAAG AGTCGGGAAT GATTGATGTT TTCCCGATGC AAGCGGTGAC GGTTGGGGAA
ATTGCCACCG AATTTGCTAA AACTCTATTT GATGGGAATC AATATACCGA TTATCTCTAT
TATCATGGTA TGGCGGTACA AACGGCGGAA GCCTTAGCCG AATGGACTCA TGTTAAAATC
CGTCAAGAAT TAGGGTTTGG GGATAAAGAA CCGGATACGA TTCGAGATAT CCTACAACAA
CGTTATCAGG GTTCTCGTTA TAGTTTTGGT TATCCGGCTT GTCCTAATAT TCAAGACCAG
TATAAACAGT TAGAATTATT AGGATGCGAT CGCATTTCTA TGTATATGGA TGATAGCGAA
CAAATCTATC CCGAACAATC TACTACAGCG ATTATTGCCT ATCATCCCGT CGCTAAATAC
TTTAGCACTT AA
 
Protein sequence
MNSPFLNRLH SPERPVLVFD GAMGTSLQTQ NLTAEDFGGL QYEGCNEYLV HTKPEAVEKV 
HRGYLEAGAD VIETDTFGGT SIVLAEYDLA DKAYYLNKTA AQLAKRVAQE YSTPQKPRFV
AGSMGPGTKL PTLGHIDFDT LKNAYIEQAE GLYDGGADLF IVETCQDVLQ IKAALNAIEE
VFQKKGNRIP IMVSITMEVM GTMLIGTEIG AALTILEPYN IDILGLNCAT GPDQMKEHIK
YLSENSPFII SCIPNAGLPE NVGGQAHYRL TPLELRMALM HFVEDLGVQI IGGCCGTRAD
HIKALAEITK DLKPKERHPH YEPSAASIYS PQPYIQDNSF LIVGERLNAS GSKKCRELLN
KEDWDSLVSM AKSQVKEGAH ILDVNVDYVG RDGVKDMKEL ASRLVNNVTL PLMLDSTEWE
KMEAGLKVVG GKCILNSTNY EDGEPRFYQV LDLAKKYGAG VVVGTIDEEG MARTAEKKFA
IAKRAYEAAV NYGLPPEEIF FDPLALPIST GIEEDRNNGK ATIEAIKRIR DELPKCHILL
GVSNISFGLN PAARQVLNSV FLHECMGVGL DSAIVSASKI LPLAKIDPEH QEICRDLIYD
RRRFEGDVCV YDPLTKLTEV FAGKTTKKTA SDKASLPIEE RLKQHIIDGE RIGLDDALAE
ALKQYPPLEI INTFLLDGMK VVGELFGSGQ MQLPFVLQSA QTMKAAVAYL EPFMEKEEGN
GNTKGKFIIA TVKGDVHDIG KNLVDIILSN NGYTVINLGI KQPVENIIQA YQEHQADCIA
MSGLLVKSTA FMKENLEVFN ERGITVPVIL GGAALTPKFV HEDCQNTYKG QVIYGKDAFS
DLHFMDKLMP AKVEGKWDDL KGFLDESADE RRLTRMVESV RVIDKDDEDG KISEPVIIDT
RRSDEVSIDI DRPIPPFWGT KILTPDEIVL DEVFKYLDLQ ALFVGQWQFR KPKDQSREEY
DQFLTDTVHP ILQGWKQRIL EEKLLHPTVI YGYFPCQSEG NSLLVYDPEI WQQSEKLDLI
WTLDFPRQKS NRRLCIADFF APKESGMIDV FPMQAVTVGE IATEFAKTLF DGNQYTDYLY
YHGMAVQTAE ALAEWTHVKI RQELGFGDKE PDTIRDILQQ RYQGSRYSFG YPACPNIQDQ
YKQLELLGCD RISMYMDDSE QIYPEQSTTA IIAYHPVAKY FST