Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3230 |
Symbol | |
ID | 7107707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 3612022 |
End bp | 3615573 |
Gene Length | 3552 bp |
Protein Length | 1183 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643481474 |
Product | methionine synthase |
Protein accession | YP_002378498 |
Protein GI | 218440169 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCC CGTTTCTTAA CCGTCTTCAT AGTCCAGAAC GTCCCGTCCT CGTTTTTGAT GGGGCAATGG GAACTTCTCT TCAGACTCAA AATTTAACGG CAGAAGATTT TGGCGGTCTT CAATATGAAG GATGTAATGA GTATTTGGTA CACACCAAAC CGGAAGCGGT AGAAAAGGTT CATCGGGGTT ATCTCGAAGC CGGGGCCGAT GTGATAGAAA CCGATACCTT CGGAGGGACT TCTATTGTTT TGGCGGAATA TGATTTAGCC GATAAAGCTT ATTATTTGAA TAAAACGGCG GCACAATTAG CCAAACGAGT TGCCCAAGAA TATTCCACCC CCCAAAAGCC CCGTTTTGTC GCCGGTTCTA TGGGGCCAGG AACGAAATTA CCGACCTTGG GGCATATTGA TTTTGATACC CTTAAAAATG CTTATATCGA ACAAGCAGAA GGTCTTTATG ATGGGGGGGC AGATTTATTT ATTGTTGAAA CCTGTCAGGA TGTTTTACAA ATTAAAGCCG CTTTAAATGC AATAGAAGAG GTTTTTCAAA AAAAAGGGAA TCGTATTCCT ATTATGGTGT CTATTACGAT GGAAGTGATG GGCACGATGT TAATTGGGAC GGAAATCGGC GCAGCTTTGA CGATTTTAGA ACCCTATAAT ATTGATATTT TAGGGCTAAA TTGTGCTACT GGTCCCGATC AAATGAAAGA ACATATAAAA TATCTTTCGG AAAATTCACC TTTTATTATT TCTTGTATTC CTAATGCCGG CTTACCGGAA AATGTGGGAG GACAGGCACA TTATCGATTA ACTCCCCTAG AATTAAGAAT GGCATTAATG CACTTTGTGG AAGATTTAGG AGTGCAAATT ATTGGGGGTT GTTGTGGGAC AAGGGCAGAT CATATTAAAG CCTTAGCAGA AATTACCAAA GATCTCAAAC CTAAAGAACG TCATCCCCAT TATGAACCTT CGGCAGCTTC TATCTATAGT CCTCAACCCT ATATTCAAGA TAATTCTTTC CTCATTGTCG GAGAAAGACT TAATGCAAGT GGGTCGAAAA AATGCCGAGA GTTATTAAAT AAAGAAGACT GGGATAGTTT AGTCTCTATG GCTAAATCTC AGGTCAAAGA AGGGGCACAT ATTTTAGATG TGAATGTGGA TTATGTGGGA CGAGATGGGG TCAAAGACAT GAAAGAATTG GCCTCTCGTC TGGTAAATAA TGTGACTCTG CCTTTAATGT TAGACTCCAC CGAATGGGAA AAAATGGAGG CAGGATTAAA AGTTGTCGGC GGGAAATGTA TTCTCAATTC GACTAACTAT GAAGATGGAG AACCTCGGTT TTATCAAGTC CTTGACTTAG CCAAAAAATA CGGGGCAGGA GTTGTTGTTG GGACGATAGA TGAAGAGGGA ATGGCACGCA CCGCAGAGAA AAAATTTGCC ATAGCTAAAC GGGCTTATGA AGCAGCCGTT AATTATGGCC TTCCTCCTGA AGAAATATTT TTTGATCCCT TGGCGTTACC GATTTCTACG GGGATAGAAG AGGATAGAAA TAACGGAAAA GCAACGATAG AAGCGATTAA ACGCATTCGA GATGAATTAC CCAAATGTCA TATTTTACTT GGGGTTTCTA ACATCTCTTT CGGGTTAAAT CCAGCCGCTA GACAGGTGTT AAACTCGGTC TTTCTACATG AGTGTATGGG CGTGGGGTTA GATTCGGCTA TTGTTAGCGC GAGTAAGATT TTACCCTTGG CTAAAATTGA CCCAGAACAT CAAGAAATCT GTCGAGATTT AATTTATGAC CGTCGCCGAT TTGAGGGGGA TGTGTGTGTT TATGATCCTT TGACGAAGTT AACGGAAGTG TTTGCCGGAA AAACCACTAA GAAGACTGCT TCAGATAAGG CTAGTTTACC GATAGAAGAA CGACTCAAAC AGCATATTAT TGATGGGGAA AGAATCGGAT TAGATGATGC TTTAGCCGAA GCCTTGAAAC AGTATCCGCC TCTAGAGATT ATTAATACTT TCCTGTTAGA TGGAATGAAA GTAGTCGGTG AGTTATTTGG GTCGGGACAA ATGCAACTGC CTTTTGTGTT ACAATCTGCC CAAACCATGA AGGCCGCAGT GGCTTATTTA GAACCGTTCA TGGAGAAGGA AGAAGGGAAC GGAAATACAA AAGGAAAATT TATTATTGCT ACGGTTAAAG GGGATGTTCA TGATATTGGT AAAAATTTGG TCGATATTAT TTTGTCTAAT AATGGCTATA CGGTGATTAA TTTAGGCATT AAACAACCGG TTGAGAATAT TATTCAAGCC TATCAAGAAC ATCAGGCTGA TTGTATCGCT ATGAGTGGTT TGTTGGTCAA ATCAACGGCT TTTATGAAGG AGAATTTAGA GGTATTTAAT GAACGAGGAA TTACGGTTCC GGTGATTTTG GGAGGTGCAG CTTTAACTCC TAAGTTTGTC CATGAAGATT GTCAGAATAC TTATAAGGGT CAGGTGATTT ATGGAAAGGA TGCTTTCTCA GATTTGCATT TTATGGATAA ATTAATGCCG GCAAAAGTTG AGGGAAAATG GGATGATTTA AAGGGGTTTT TAGATGAGTC CGCAGATGAA CGCAGATTAA CACGGATGGT TGAGTCTGTG CGTGTTATAG ATAAGGATGA TGAGGATGGA AAGATTAGTG AACCGGTAAT TATTGATACT CGTCGTTCTG ATGAGGTTAG TATAGATATT GACCGTCCTA TTCCTCCTTT CTGGGGGACG AAGATTTTAA CTCCTGATGA GATTGTTTTA GATGAGGTTT TCAAATATTT AGATTTACAA GCGTTGTTTG TGGGACAATG GCAATTCCGC AAACCGAAAG ACCAGTCACG GGAAGAATAC GACCAATTTT TAACGGATAC GGTTCATCCA ATTTTACAAG GGTGGAAACA GCGTATTCTT GAGGAAAAGT TGTTACATCC TACGGTCATT TATGGGTATT TTCCTTGTCA GTCTGAGGGG AATTCTTTAC TGGTTTATGA CCCAGAAATT TGGCAACAGT CAGAAAAATT AGACCTCATT TGGACATTAG ATTTTCCTCG ACAAAAGTCA AACCGCCGGT TGTGTATTGC TGATTTCTTT GCGCCGAAAG AGTCGGGAAT GATTGATGTT TTCCCGATGC AAGCGGTGAC GGTTGGGGAA ATTGCCACCG AATTTGCTAA AACTCTATTT GATGGGAATC AATATACCGA TTATCTCTAT TATCATGGTA TGGCGGTACA AACGGCGGAA GCCTTAGCCG AATGGACTCA TGTTAAAATC CGTCAAGAAT TAGGGTTTGG GGATAAAGAA CCGGATACGA TTCGAGATAT CCTACAACAA CGTTATCAGG GTTCTCGTTA TAGTTTTGGT TATCCGGCTT GTCCTAATAT TCAAGACCAG TATAAACAGT TAGAATTATT AGGATGCGAT CGCATTTCTA TGTATATGGA TGATAGCGAA CAAATCTATC CCGAACAATC TACTACAGCG ATTATTGCCT ATCATCCCGT CGCTAAATAC TTTAGCACTT AA
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Protein sequence | MNSPFLNRLH SPERPVLVFD GAMGTSLQTQ NLTAEDFGGL QYEGCNEYLV HTKPEAVEKV HRGYLEAGAD VIETDTFGGT SIVLAEYDLA DKAYYLNKTA AQLAKRVAQE YSTPQKPRFV AGSMGPGTKL PTLGHIDFDT LKNAYIEQAE GLYDGGADLF IVETCQDVLQ IKAALNAIEE VFQKKGNRIP IMVSITMEVM GTMLIGTEIG AALTILEPYN IDILGLNCAT GPDQMKEHIK YLSENSPFII SCIPNAGLPE NVGGQAHYRL TPLELRMALM HFVEDLGVQI IGGCCGTRAD HIKALAEITK DLKPKERHPH YEPSAASIYS PQPYIQDNSF LIVGERLNAS GSKKCRELLN KEDWDSLVSM AKSQVKEGAH ILDVNVDYVG RDGVKDMKEL ASRLVNNVTL PLMLDSTEWE KMEAGLKVVG GKCILNSTNY EDGEPRFYQV LDLAKKYGAG VVVGTIDEEG MARTAEKKFA IAKRAYEAAV NYGLPPEEIF FDPLALPIST GIEEDRNNGK ATIEAIKRIR DELPKCHILL GVSNISFGLN PAARQVLNSV FLHECMGVGL DSAIVSASKI LPLAKIDPEH QEICRDLIYD RRRFEGDVCV YDPLTKLTEV FAGKTTKKTA SDKASLPIEE RLKQHIIDGE RIGLDDALAE ALKQYPPLEI INTFLLDGMK VVGELFGSGQ MQLPFVLQSA QTMKAAVAYL EPFMEKEEGN GNTKGKFIIA TVKGDVHDIG KNLVDIILSN NGYTVINLGI KQPVENIIQA YQEHQADCIA MSGLLVKSTA FMKENLEVFN ERGITVPVIL GGAALTPKFV HEDCQNTYKG QVIYGKDAFS DLHFMDKLMP AKVEGKWDDL KGFLDESADE RRLTRMVESV RVIDKDDEDG KISEPVIIDT RRSDEVSIDI DRPIPPFWGT KILTPDEIVL DEVFKYLDLQ ALFVGQWQFR KPKDQSREEY DQFLTDTVHP ILQGWKQRIL EEKLLHPTVI YGYFPCQSEG NSLLVYDPEI WQQSEKLDLI WTLDFPRQKS NRRLCIADFF APKESGMIDV FPMQAVTVGE IATEFAKTLF DGNQYTDYLY YHGMAVQTAE ALAEWTHVKI RQELGFGDKE PDTIRDILQQ RYQGSRYSFG YPACPNIQDQ YKQLELLGCD RISMYMDDSE QIYPEQSTTA IIAYHPVAKY FST
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