Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3186 |
Symbol | |
ID | 7108100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 3568937 |
End bp | 3570421 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643481432 |
Product | glycolate oxidase, subunit GlcD |
Protein accession | YP_002378456 |
Protein GI | 218440127 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.602747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTAC AAAACATCCT CAACCGAAGT AAAAACAAAT GGCAACCCAT CATTAAACAA TTTGAAGCGA TCGTTGGTAA AGATGGAGTC GTACAACGCA AGGATGAATT GTTGACCTAT GAATGTGATG GGATAACCGG ATATCGTCAA CGTCCTGCGG TTGTGGTTTT ACCTCGAACC ACTGAACAAG TAGCCGCCGT CGTTAAAATT TGTCACGATC GAGATATTCC TTGGGTAGCT AGAGGGGCAG GAACAGGGTT ATCAGGAGGG GCACTCCCCT TAGAAAATGG GGTTCTCATT GTCACCGCCC GCATGAAACA GATTTTAAAG ATAGATTTAG AAAATCAACA AGTTGTGGTG CAACCCGGCG TGATTAATAA TTGGGTGACT GGGGCGGTTA GCGGCGCAGG ATTTTATTAT GCTCCCGATC CCTCAAGTCA GATTATTTGT TCGATTGGGG GTAATATAGC AGAAAACTCC GGCGGGGTTC ATTGCCTTAA ATATGGGGTG ACGACGAATC ATGTTTTAGG GCTAAAAATA GTCATTCCCG ATGGTTCAAT TATCGATGTT GGGGGAGTCA TTCCCGAAAT GCCGGGTTAT GATTTAAGAG GTTTATTTGT CGGTTCTGAA GGAACATTAG GTATCGCTAC AGAAATTACT TTACGTATTC TTAAAGTTCC TGAATCTATT TGTGTCCTGT TAGCCGATTT TACCTCTGTT GAGGCTGCCG GGCAAGCCGT AGCCGATATT ATCGCTGCCG GTATCATTCC CGCCGGCATG GAAATTATGG ATAATCTCAG TATTAATGCG GTGGAAGATG TAGTATCAAC GGGGTGTTAT CCGAGGGATG CTGCTGCTGT TTTATTAGTA GAATTAGACG GACTGCAAGT GGAAGTTACC GCCAATAAAC TCAGAGTAGG GGAAATTTGT CAACAGAATG GTGCAAGAAA TGTCACGACT GCCAATGACC CCGAAACTCG CTTAAAATTT TGGAAAGGAC GAAAAGCCGC TTTTGCTGCC GCCGGACAAA TGAGTCCGAA TTATTTTGTT CAAGATGGAG TAATTCCTCG GACTCGGTTA GCGGACGTAC TTCGGGAAAT TAATCAACTC AGTGAAAAAT ATGGGTATCC TATCGCTAAT GTATTTCATG CTGGAGATGG AAACCTTCAT CCTTTAATTT TGTATGATAA TAAAGTAGAG GGAGCATGGG AAGAAGTCGA AGAATTAGGC GGTGAAATCC TTAAACTCTG TGTCCGTTAT GGGGGTAGTC TATCAGGAGA ACATGGCATC GGTATTGACA AAAACTGTTA TATGCCCGAA ATGTTTAACG AAATAGACTT AGAAACGATG GGTTATGTTC GAGACTGTTT TAATCCTAAA GGATTAGCCA ACCCAGGTAA ACTTTTTCCG ACTCCTCGCA CTTGTGGAGA AGCGGCTAAT GCTAAAAAAA TAGATAAAAA TATTGAAGGG GCAGAACTTT TTTAA
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Protein sequence | MLLQNILNRS KNKWQPIIKQ FEAIVGKDGV VQRKDELLTY ECDGITGYRQ RPAVVVLPRT TEQVAAVVKI CHDRDIPWVA RGAGTGLSGG ALPLENGVLI VTARMKQILK IDLENQQVVV QPGVINNWVT GAVSGAGFYY APDPSSQIIC SIGGNIAENS GGVHCLKYGV TTNHVLGLKI VIPDGSIIDV GGVIPEMPGY DLRGLFVGSE GTLGIATEIT LRILKVPESI CVLLADFTSV EAAGQAVADI IAAGIIPAGM EIMDNLSINA VEDVVSTGCY PRDAAAVLLV ELDGLQVEVT ANKLRVGEIC QQNGARNVTT ANDPETRLKF WKGRKAAFAA AGQMSPNYFV QDGVIPRTRL ADVLREINQL SEKYGYPIAN VFHAGDGNLH PLILYDNKVE GAWEEVEELG GEILKLCVRY GGSLSGEHGI GIDKNCYMPE MFNEIDLETM GYVRDCFNPK GLANPGKLFP TPRTCGEAAN AKKIDKNIEG AELF
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