| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3149 |
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| Symbol | |
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| ID | 7108063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 3528341 |
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| End bp | 3529228 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643481395 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_002378419 |
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| Protein GI | 218440090 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.363768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTACAG CAAAACTTGA CCCAGTTCGC TCCTATCTTC AAGAAATTGG ACGAATTCCC
CTATTAAATT CTGAGGAAGA AGTTCAACTA GCGACTAAAG TGCAAAATAT GTTGCCTTTA
TTAGAAAAAG AAAATCTGAC GGCAGCAGAA AAGAAAATTG TAGAGCAAGG GCAAATCGCC
AAGCGAAAAA TGATTCAAGC TAACTTACGC TTAGTGGTTT CTATCGCTAA AAGATACCAG
AGACGGGGTT TATCGTTATT AGATTTAATT CAAGAAGGAA GTTTAGGATT AATTCGGGCT
GTTGAAAAAT TTGATCCGTC TAAAGGATAT AAATTTTCGA CTTATGCTTA TTGGTGGGTT
CGACAAGCGA TTACTAGGGC ACTTGCAGAA AAAAGTCGTA CCATTCGTCT GCCGATTCAC
ATGACAGAAA ATTTAAATCA ACTCAAAAAA AGTGTGCGAG AATTGACTGG GGAATTAGGC
AGAAAACCGA ATGAACAAGA AGTTGCTCAA CGGATGGAAA TTCCAGTTGA AAAATTAAGA
GAAATTCGTC ACGCTGTTTA TCGAACCGAT GCTAAAAGTT TGAATATTAC TTTAGATGAT
AATCAAACCG AATTAGGGGA AGTTTTACCC GATGAAACCT CTTTGCCAAT TGAATTTGTT
TCTCAATGGG AATTAGTGAC TAAAATTAAC GATTTACTCG AAGATTTACC CCCACGCCAA
CGAGAAATTA TTACTCTACG TTTTGGCTTA CAAACTGGTA AACGAATGAG TTATAAAGAA
ATTGGGCGAC AATGCGGAAT TAGCCATGAA CGGGCACGAC AGCTATTAAA TCGAGCTATG
AGAACTCTAA AACAGAAAGC TTTTCGCCTT GGAGAAGTTG CTGTCTAA
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| Protein sequence | MATAKLDPVR SYLQEIGRIP LLNSEEEVQL ATKVQNMLPL LEKENLTAAE KKIVEQGQIA
KRKMIQANLR LVVSIAKRYQ RRGLSLLDLI QEGSLGLIRA VEKFDPSKGY KFSTYAYWWV
RQAITRALAE KSRTIRLPIH MTENLNQLKK SVRELTGELG RKPNEQEVAQ RMEIPVEKLR
EIRHAVYRTD AKSLNITLDD NQTELGEVLP DETSLPIEFV SQWELVTKIN DLLEDLPPRQ
REIITLRFGL QTGKRMSYKE IGRQCGISHE RARQLLNRAM RTLKQKAFRL GEVAV
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