Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3146 |
Symbol | |
ID | 7108060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 3523643 |
End bp | 3525511 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643481392 |
Product | alpha amylase catalytic region |
Protein accession | YP_002378416 |
Protein GI | 218440087 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.476414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACA AATTTACCCT ACCTGAGTTT ATTTTTGGTG AATTATCTAC CCCTCAAGGT CGTCTCAAAC GCACCAGATT ATCAAAATTC GGGTTACATC ATGATTGTAT AATTTCTCCG GTTGATCCCC AAGAAAACGA AGCGATTCAA ATCAGCGTTA CTGTTGGGGC AGAAATAGCC GTAAAAAGTG TCATCCTATA TTATACCACT GATGGAACAC TCCCAACAGA CCTGAATAAT CCTGCTATTT GTACTATAGC TTTAGAACGA ACAGAAATTA CATGGGATAC TTTAGAATGG ACTTATTTAG AACGTTGGAC AGGGGAAATT CCCGGACAAC CTCAAGGAAC TTATATTCAC TATGCGATCT CTGCAATAAC TCCCACCAAC CACATCCTTT ATTGTCCTTA CATTGATTTA AATGGTCTGT CGCATTTTGA AGATCTAGAA AACCTCGATT TAAAACTGAT CAAAAAGTTT AATTCAGAAA ATAAGCCTCA AATTTATGGA TTTTCAGTAG ATCAAGACAG AATTCCTCAG TGGTTAAAAG AAGCGGTTAT TTACGAAATT TTTGTTGATC GCTTTGCACC TTCTCCCAAG GAAGACTTTA AAACCCCAAG CGATCGCAGT GGATTTTATG GGGGAACTCT CAAAGGAATT ATTAGCAAAC TCGACTATTT AAAAGAATTA GGCATAACTT GTCTGTGGTT AACTCCTATT TTTCGGAGTC CTTCACATCA TGGGTACGAT CCGATCAGTC ATAGTGAGAT TGAACCCCGT TTAGGCACTC TCGAAGATTG GAAAATGTTG GTTAAAGAAG CGCAAATTCG AGGAATACGA ATTATTCTTG ATTATGTAAT TAATCATTTA TCTAACGAAC ATCCTACTTT TAAAGAAGCA CAAAAAGATC CTCAAAATTC TGCTTATCAT TGGTTTCGTT TTCAAAATTG GCCGAATACT TATGACAGTT TTTTTGATGT TCCCAGTCAA CCTGAAATCA ATTCTGACTA TCCAGAAGTG AGAAACTATT TAATTACAAA TGCTTGCTAT TGGTTAGAAC AAGGATGTGA TGGATTTCGT CTTGACTATG CTCACGGAGC AACTCATGCT TTTTGGTCAG TTTTTCGCCG TGCGACTCGA CAAGTTAAAG AGGAGAGTGT TACCGTTGGA GAAATTACAG TTCCACCTGA TTTATTGCGT TCCTATTCAG GACGTATGGA TGGATGTTTA GACTTTAAAG TTTTAGAATT ATTGCGAAGT TTCTTCGGGT TTAATAATTT AACAGTCAGT CAATTTGATA AAAAATTAGA CCAACATTTT GCTTATTTTT ATTCTAATTT TGTTTTACCT AGTTTTTTAG ATAATCATGA TATGAATCGC TTTTTATGGA TTGTCGAGGG AGATAAGCGA CGGTTAAAAT TAGCAGCATT ATGTCAGTTT ACCTTACCGA ATCCACCGAT TATTTATTAT GGGACAGAAG TGGGATTAAG TCAGTTACAA GAGGTAGGAA GACTTGAAGA ATCTCGCTTA CCTATGATTT GGGGAGAACA GCAAGATTTA GAGTTATTAA AATTTTATCA AGAGTTAATT AATCTACGTC GTCACTGCCA ATTTTGGAGA CATTCTCGAC AAAGTTTAGT GCTTGATGAT CATCGACAGT TATATGTTTA TGCTTGTGGA GATTGGTTAA TTGCTTTAAA TAATAGTTCT CATCATGCAG ATTTAACGTT ATCAGAATGG CACTCTGGGC AATTAGCATT TATCACAGAT AATCAGGTAA ATTGGCATAA TTTTACGGCT CAATTGAATT TAACTCCGTT TTCTGGTGCA GTTATACAAA GAGCTATAGC AATCAGGAAT CAGATGTGA
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Protein sequence | MTDKFTLPEF IFGELSTPQG RLKRTRLSKF GLHHDCIISP VDPQENEAIQ ISVTVGAEIA VKSVILYYTT DGTLPTDLNN PAICTIALER TEITWDTLEW TYLERWTGEI PGQPQGTYIH YAISAITPTN HILYCPYIDL NGLSHFEDLE NLDLKLIKKF NSENKPQIYG FSVDQDRIPQ WLKEAVIYEI FVDRFAPSPK EDFKTPSDRS GFYGGTLKGI ISKLDYLKEL GITCLWLTPI FRSPSHHGYD PISHSEIEPR LGTLEDWKML VKEAQIRGIR IILDYVINHL SNEHPTFKEA QKDPQNSAYH WFRFQNWPNT YDSFFDVPSQ PEINSDYPEV RNYLITNACY WLEQGCDGFR LDYAHGATHA FWSVFRRATR QVKEESVTVG EITVPPDLLR SYSGRMDGCL DFKVLELLRS FFGFNNLTVS QFDKKLDQHF AYFYSNFVLP SFLDNHDMNR FLWIVEGDKR RLKLAALCQF TLPNPPIIYY GTEVGLSQLQ EVGRLEESRL PMIWGEQQDL ELLKFYQELI NLRRHCQFWR HSRQSLVLDD HRQLYVYACG DWLIALNNSS HHADLTLSEW HSGQLAFITD NQVNWHNFTA QLNLTPFSGA VIQRAIAIRN QM
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