| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3122 |
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| Symbol | |
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| ID | 7107908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 3494485 |
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| End bp | 3495603 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643481368 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_002378392 |
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| Protein GI | 218440063 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTG CAAAATTAGA AGCAAATAAC TCTCCAACCC ACACTGTTCA TGCAGTGACA
ATGACATCGG AAGATAAAGC TCAAGCCGTT GCACAAGTGG AATTAGAGCT TGCAAATCTT
AATGATGAAA CCGGAAATCC TTATCCTGCC GGATACTCAA AAACCAACTC AGACGATACG
GTAGGAGCGT TTTTTAAGGA AATGGCACGT TATCCCCTAC TCAAACCCGA AGAAGAGATT
GAGTTAGCTT ATACGGTCAA ATTCTTAATG GAATCTGAAG AAAAGCGACA ACAACTGCAA
ATCGATTTAC AACGCCCGCC AACAAAGTTA GAATGGGCAC AAGCGATGGG ATTACAAAAT
GAACGTCAAT TAGAAAATCG GCTATATCGA GGGCGATCTG CCAAACGAAA AATGATTCGC
TCAAATTTAC GATTAGTCGT TTCTATTGCC AAACGTTATC TTAATCGGGG AGTGCCTTTT
TTAGATTTAA TTCAAGAAGG AGCGATCGGG TTAAATCGAG CGGCAGAAAA ATTTGATCCT
AATAAAGGAT ATAAATTTTC GACTTATGCT TATTGGTGGA TTCGTCAAGC GATTACCCGA
ACAATTGCCA ATGATGCGAG AACGATTCGC TTACCGATTC ACATTGTCGA AAAACTCAAT
AAACTCAAAA AAGCTCAACG AGTTCTCAAA CAACAACTCC ATCGCAACCC AACCGAAAAA
GAATTAGCTC AAGCTTTAGA GGTAGATGCA GAAAATTTAC GTCAATTACT CCAATTACGT
CGTCAATCTT TATCCTTAAA CCATCGTGTC GGAAAAGGAG AAGACACCGA ATTAGTCGAC
TTGCTCGAAG ATGAAGATTT GCAACTGCCT GAAGAAAAAA TGAATGAAGC CATGATGCGT
CAGGATATTT CAGCAGTCTT AACCGATGTT CTCACTGAGC GAGAAAAAGA TGTGATTGCT
TTGCGCTATG GCTTAAGTAC CAGTCAACCC TATACCTTAG AAGAAGTCGG CGGGATTTTC
AATCTCTCCC GGGAAAGGGT GCGTCAGATT CAAAGTAAAG CGATGCGGAA GTTACGCCGT
CCTCAAGTAG CTCGTCGTCT GAAAGGATGG TTAATTTAA
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| Protein sequence | MNTAKLEANN SPTHTVHAVT MTSEDKAQAV AQVELELANL NDETGNPYPA GYSKTNSDDT
VGAFFKEMAR YPLLKPEEEI ELAYTVKFLM ESEEKRQQLQ IDLQRPPTKL EWAQAMGLQN
ERQLENRLYR GRSAKRKMIR SNLRLVVSIA KRYLNRGVPF LDLIQEGAIG LNRAAEKFDP
NKGYKFSTYA YWWIRQAITR TIANDARTIR LPIHIVEKLN KLKKAQRVLK QQLHRNPTEK
ELAQALEVDA ENLRQLLQLR RQSLSLNHRV GKGEDTELVD LLEDEDLQLP EEKMNEAMMR
QDISAVLTDV LTEREKDVIA LRYGLSTSQP YTLEEVGGIF NLSRERVRQI QSKAMRKLRR
PQVARRLKGW LI
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