Gene PCC7424_2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2974 
Symbol 
ID7108519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3317859 
End bp3318917 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content48% 
IMG OID643481217 
Productphotosystem II D2 protein (photosystem q(a) protein) 
Protein accessionYP_002378245 
Protein GI218439916 
COG category 
COG ID 
TIGRFAM ID[TIGR01152] Photosystem II, DII subunit (also called Q(A)) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTG CAGTCGGACG TGCCCCAGTC GAAAGAGGCT GGTTTGATGT AGTCGATGAC 
TGGCTCAAGC GCGATCGCTT TGTCTTCATC GGTTGGTCTG GTTTATTACT TTTCCCCTGT
GCTTACATGG CACTAGGGGG ATGGTTAACC GGGACTACTT TTGTGACCTC TTGGTACACT
CACGGGTTAG CCAGTTCTTA CTTAGAAGGA TGTAACTTCT TGACCGTAGC GGTTTCTACT
CCTGCTGACA GTATGGGTCA CTCCATTCTG TTCCTGTGGG GGCCAGAAGC TCAAGGAGAT
TTCACCCGTT GGTGTCAAAT TGGCGGATTA TGGCCGTTTG TCGCCCTTCA CGGAGCTTTC
GCACTGATTG GCTTCATGTT ACGTCAGTTT GAAATTTCTC GTTTAGTCGG CATCCGTCCT
TACAACGCTA TTGCTTTCTC TGCGCCTATT GCGGTATTCG TATCAGTATT CCTGATGTAC
CCCTTGGGAC AGTCTAGCTG GTTCTTTGCG CCTAGCTTCG GAGTAGCGGG AATCTTCCGT
TTCATCCTGT TTGTACAAGG ATTCCACAAC TTCACCCTCA ACCCCTTCCA CATGATGGGA
GTAGCGGGTG TACTCGGTGG AGCTTTACTT TGTGCCATTC ACGGAGCAAC GGTAGAAAAT
ACCCTGTTCC AAGATGGGGA CGAAGCGAAC ACCTTCAGAG CATTTGAACC CACCCAAGCG
GAAGAAACCT ATTCAATGGT GACCGCGAAC CGTTTCTGGT CACAAATCTT TGGAATTGCG
TTTTCTAACA AACGTTGGTT ACACTTCTTC ATGTTATTTG TGCCCGTAAC CGGATTATGG
ATGGCGAGTA TCGGCATCAT CGGAATTGCC CTGAACTTAC GGGCTTATGA CTTTGTGTCA
CAAGAATTAC GGGCTGCTGA AGACCCAGAG TTTGAAACAT TCTATACTAA AAACATTCTG
CTGAACGAAG GGTTAAGAGC TTGGATGGCT CCCCAAGATC AGCCTCACCA AAACTTTGTA
TTCCCTGAAG AAGTTCTACC TCGTGGTAAT GCTCTCTAA
 
Protein sequence
MTIAVGRAPV ERGWFDVVDD WLKRDRFVFI GWSGLLLFPC AYMALGGWLT GTTFVTSWYT 
HGLASSYLEG CNFLTVAVST PADSMGHSIL FLWGPEAQGD FTRWCQIGGL WPFVALHGAF
ALIGFMLRQF EISRLVGIRP YNAIAFSAPI AVFVSVFLMY PLGQSSWFFA PSFGVAGIFR
FILFVQGFHN FTLNPFHMMG VAGVLGGALL CAIHGATVEN TLFQDGDEAN TFRAFEPTQA
EETYSMVTAN RFWSQIFGIA FSNKRWLHFF MLFVPVTGLW MASIGIIGIA LNLRAYDFVS
QELRAAEDPE FETFYTKNIL LNEGLRAWMA PQDQPHQNFV FPEEVLPRGN AL