Gene PCC7424_2659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2659 
Symbol 
ID7107611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2943347 
End bp2945044 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content40% 
IMG OID643480910 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002377939 
Protein GI218439610 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.144865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCTC CTCACCTAAA ACCTAAATCT TCTCCTAATG GCAAGTTTTT TAGGTTGCTT 
GTTTTGGTCT CTCTTCTCAT TGCTGCGCCT CTGTTGACTC TTCAGGTAGC GGCTAGAGTC
TATTTAATGC AGGGCGATCG CTTTTTGGCT CAAAATCAAC TTGAAAAGGC GATTAATTCT
TACTCCACCG CCACTAAATT ACAGGCTAAT TTTGCTACGG TTTATCTTCG TTTAGGAAAA
GCGTTACAAA AAAATCAACA GTTTACTGAA GCTTTAAAAG CCTACAATCA AGCTTTTTTA
ATTAATCCTG ACTTAACGGT TCAATCTGAT TTAGCCTCTG ATTTAACTCG TTTAGGGGCT
GTTCTCTTAA AAAAGGGCAA TGTATCAGAA GCGATTATAG CCTATCAAAT CGCGGTTGCT
ATTGATCCGT TAGCTATAGA AGCTAATCAT AACTTAGGAA AAGCATTAGC TCAACAACAA
CGTTGGCAAG AAGCAGGACA AGCGTTTAAT CAAGTTATTC TATTTGACCC TGATAATGCT
CAGGCCTATA CTAACCTGGG TAATGCTCTG TTTAAACAAG AAAAATGGCA CGAAGCGAAA
AAAATTTATG AAAAAGCGCT TGAATTAACT CCTAAAGATG CCTTAATTCA TCAACGTTTA
GCAGAAATTC TGGTTGAGAT TGGAGAATTT AACAGTGCTG AAACCCTCTA TTTAAAAGCT
CTTGCCCTTG CCCCTAACCA AGGCGATTTA TATAATGGGT TGGGTCAGGT TTTATACGAA
CAAAAAAAAG TAGACGAGGC AATTAACGCT TATCAAAAAG CTATAAAACT TAGCCCTAAT
AACCCTGAAA TTTATAAAAA TTTTTGTTTT GCTCGTCATA CTCAACATCA ATATGAAGAA
GCTTTAAAAT TATGCCGCCA AGCCATGACC TTAAATCCTG CGGAAGGAGG GGCCAAATTT
TATGTCATGG AAGTTGAACG CGCTTTAGCT ATCCTGAAAA ACCCAAACCT CTTACAGATG
CCAGAGCGTA TCCCTAGCCC TCAAACCGAT CCTTACATAT CATATAAACG CTCTATTGTC
AAGGTAGTGA TCAAAAGTTC CAATTATCAA GGGGTGGGAA CCGGATGGGT GCTTAAACGA
GAGGGAAAAA ACGCTCTTAT TGTCACTAAC CGTCATGTAG TCACCAATCC GGAGCAAAAA
CAGGAGCAAG ACGCTAAGAT TGAGGTAGAG TTGTATAGTC AACCCCCCGC CGGTCAAATT
CGCAAACGAA TTCCGGCTCA TTTGCTCGAA AAAACAGACC CTAATGATTG GTTAGATATA
GCTGTTTTAA AAGTAACGGA TTTGCCCCAA GATATTCAAC CTTTATCTTT ATCTTCCGTT
TCTCCCCCAG AGGCGAGTAA AATTGAAGTC ATCGGACATC CCATTACAGG AGATGATTGG
TCAGTTGCTT CGGGACAGGT ACAATCTGTC ACAGAGCAAG AATTATATTT ATCTGTAGTT
TTAGCATCAG GGAATTCTGG GGGGCCGGTT TTAGATTCTA ACTATCAGGT GATTGGCGTT
GTGGTTAAGG CCGGGTTATT TTGCCCACAG ACTTCAAGCA ATAATCAAAT TAATGTATCC
TTGTTAAATA AATTAGGCTG TGGGATCGCT TTTCCTATCG AATTAGTCCA AGAAAGATTG
AATCAGTGGG GAATTTAA
 
Protein sequence
MRSPHLKPKS SPNGKFFRLL VLVSLLIAAP LLTLQVAARV YLMQGDRFLA QNQLEKAINS 
YSTATKLQAN FATVYLRLGK ALQKNQQFTE ALKAYNQAFL INPDLTVQSD LASDLTRLGA
VLLKKGNVSE AIIAYQIAVA IDPLAIEANH NLGKALAQQQ RWQEAGQAFN QVILFDPDNA
QAYTNLGNAL FKQEKWHEAK KIYEKALELT PKDALIHQRL AEILVEIGEF NSAETLYLKA
LALAPNQGDL YNGLGQVLYE QKKVDEAINA YQKAIKLSPN NPEIYKNFCF ARHTQHQYEE
ALKLCRQAMT LNPAEGGAKF YVMEVERALA ILKNPNLLQM PERIPSPQTD PYISYKRSIV
KVVIKSSNYQ GVGTGWVLKR EGKNALIVTN RHVVTNPEQK QEQDAKIEVE LYSQPPAGQI
RKRIPAHLLE KTDPNDWLDI AVLKVTDLPQ DIQPLSLSSV SPPEASKIEV IGHPITGDDW
SVASGQVQSV TEQELYLSVV LASGNSGGPV LDSNYQVIGV VVKAGLFCPQ TSSNNQINVS
LLNKLGCGIA FPIELVQERL NQWGI