Gene PCC7424_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2443 
Symbol 
ID7110754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp2724200 
End bp2724859 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content35% 
IMG OID643480699 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionYP_002377731 
Protein GI218439402 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.880295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGA GTAAAATTGA ACTTAATATT AGAAGTTCTG CTGTGAGTAC CGACTTAAGT 
GATTGCCACA AATTGCATCA AAGAGTAATG CAAGGTTTTC CTAATGAAAA TAACCCTGAG 
TATCGAAGTG AAGCAAAAAT TCTCTATCGT TTAGAAGGTT CAATTCTTTT TGTTCAATCA 
AAAAATAAAC CAGATTGGAC TCAATTACCG AAAGGATATA CAGCCGAAGA AATCACAGAA 
ATGGATTATG AAAAAATCAA AAAAGGCGAC TATTTATACT TTCGCTTGTT AGGTAATCCT 
GTTCAACAAA CCACAAAACT TCGTACAGAT GATTCGGGGA ATATAATAAT GAAAAATAAT 
TCTGAGAAGC CGCAAAAAAA GACTGTTCGT CGTTTTCTTT CAAATAAAGA TGCACAAATT 
CAATGGTTAA TGAATCATTT GAAAGGGACA ATACTTCAGG AATGTTATGT CTCTGCCTCT 
AGCGACATTC GTGGACAATG CAAACAAAGC AAACGAATAT TTCTTAAAAC AGTTTTATTT 
GATGGGGTTC TACAAGTTAC CGACTCGGAA AGTTTTATTA AAGCATTACG AGAGGGGATT 
GGTAGGGGAC GGTCTTACGG ATGTGGGTTG CTCTCTATTG CTAAATTTAA TCCCAATTGA
 
Protein sequence
MYLSKIELNI RSSAVSTDLS DCHKLHQRVM QGFPNENNPE YRSEAKILYR LEGSILFVQS 
KNKPDWTQLP KGYTAEEITE MDYEKIKKGD YLYFRLLGNP VQQTTKLRTD DSGNIIMKNN 
SEKPQKKTVR RFLSNKDAQI QWLMNHLKGT ILQECYVSAS SDIRGQCKQS KRIFLKTVLF 
DGVLQVTDSE SFIKALREGI GRGRSYGCGL LSIAKFNPN