| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2254 |
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| Symbol | |
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| ID | 7111322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 2506049 |
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| End bp | 2507569 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643480512 |
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| Product | carotene isomerase |
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| Protein accession | YP_002377544 |
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| Protein GI | 218439215 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02730] carotene isomerase
[TIGR02734] phytoene desaturase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.000347702 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAATTTAA CTGATAATAT AACAACTGAC ACCGACTATG ATGTCATTGT AATCGGCTCT
GGCATTGGGG GATTAGTAAC GGCTACTCAA CTGGCGGCCA AAGGAGCAAA AGTGCTAGTC
TTAGAACGTT ATCTGATTCC GGGGGGAAGT GCGGGATATT TTGAACGAGA AGGTTATCGG
TTTGATGTGG GAGCATCGAT GATCTTTGGG TTTGGGACAA AAGGAACAAC TAACCTCCTG
ACTCGCGCTC TTAAAGCCGT TAATATGAGT TTAGACACTA TTCCGGATCC GGTGCAAATT
CATTATCATT TACCAGACGG ATTAGATTTA AAAGTTCATC GAGATTATGA GAAATTTATC
GAAGAATTGA CCCGACATTT TCCCCATGAA AAAGAGGGAA TTCGTCGTTT TTATGATGAA
TGTTGGAAAG TATTTAACTG CTTAAATGCA ATGGAATTAC TTTCTTTAGA AGAACCTCGT
TATCTGATGC GGGTCTTTTT TCAGCATCCG GGAGCTTGTT TAGGGTTAGT AAAATATTTA
CCGCAAAATA CAGGAGATGT GGCCCGTCGT TATATTAGCG ACCCTAAATT ACTCAAATTT
ATTGATATGG AATGTTATTG CTGGTCGGTT GTTCCTGCGA ATCAAACTCC CATGATTAAT
GCAGGAATGG TTTTTTCAGA CCGGCATTAT GGAGGAATTA ACTATCCTAG AGGGGGAGTA
GGACAAATTG CCCAGAAATT AGTCGATGGG TTAGAAAAAT CCGGCAGTGA GATTAAATAT
CAGTCGAGAG TTACCCAAAT TTTGCTAAAA AACGGCAAAG CAGTCGGAGT AAAACTCGCC
AATGGTCAAG AATATTATGC TAAACGAATT GTTTCTAATG CCACTCGTTG GGATACCTTT
GAAAAATTAA TTTCTCCGGC AACTCTACCG ACTCAAGAGA GAAAATGGCA AAAACGTTAT
CATAAATCTC CTAGTTTTCT AAGTTTACAT TTAGGAGTTA AAGCAGAGGT TTTACCCCCC
AATACCGAAT GTCATCACAT CTTACTCGAA AATTGGCAAC AGATGGAAGA TGAACAAGGG
ACAATTTTTG TGTCTATTCC TACCTTACTT GACCCGAATT TAGCCCCCCA AGGCCATCAT
ATCATTCATG CCTTTACTCC TAGCTGGATC AAACACTGGC AGGGATTAAC CCCCAAAGAC
TACCAACAGA AAAAAGAAGA GGCAGCCGGA CGCATTATTG AACGACTAGA ACAGATTTTG
CCCGGTATCT CCCAAGGATT AGATTATCAG GAAGTCGGAA CGCCCCGAAC TCATCGACGC
TTTTTAGGAC GAGTCGACGG CACTTATGGC CCCATTCCTC GCTATAAATT ACCTGGATTA
TTGACAATGC CTTTTAATCG CACCTCGATT TCTGGACTCT ATTGTGTCGG AGATAGTACC
TTTCCTGGTC AAGGATTAAA TGCTGTGGCT TTTTCTGGGT TTGCTTGTGG TCATCGTATC
GGAGTTGACT TAGGACTATA G
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| Protein sequence | MNLTDNITTD TDYDVIVIGS GIGGLVTATQ LAAKGAKVLV LERYLIPGGS AGYFEREGYR
FDVGASMIFG FGTKGTTNLL TRALKAVNMS LDTIPDPVQI HYHLPDGLDL KVHRDYEKFI
EELTRHFPHE KEGIRRFYDE CWKVFNCLNA MELLSLEEPR YLMRVFFQHP GACLGLVKYL
PQNTGDVARR YISDPKLLKF IDMECYCWSV VPANQTPMIN AGMVFSDRHY GGINYPRGGV
GQIAQKLVDG LEKSGSEIKY QSRVTQILLK NGKAVGVKLA NGQEYYAKRI VSNATRWDTF
EKLISPATLP TQERKWQKRY HKSPSFLSLH LGVKAEVLPP NTECHHILLE NWQQMEDEQG
TIFVSIPTLL DPNLAPQGHH IIHAFTPSWI KHWQGLTPKD YQQKKEEAAG RIIERLEQIL
PGISQGLDYQ EVGTPRTHRR FLGRVDGTYG PIPRYKLPGL LTMPFNRTSI SGLYCVGDST
FPGQGLNAVA FSGFACGHRI GVDLGL
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