Gene PCC7424_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2230 
Symbol 
ID7109412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp2476161 
End bp2476856 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content36% 
IMG OID643480483 
ProductSNARE associated Golgi protein 
Protein accessionYP_002377520 
Protein GI218439191 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.571978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA TAAAACAACA CAACTATCTA AGGAAGAAAC TAGCTAACCT CTTAATTTCC 
AAACGCTTTT GGATAGGAAT TACCCTGTTT ATTATTGCCC TTTTATTTAC CCTCAGCCCT 
TTAAAAATTA TCTTTAATCC AAATTTTTTA GTCAATTTTT TTCAAGCTAA TTCTTCTTTT 
GCTGTTCCTC TGTTTATTAT TGCCTATATT ATTCTGTCAG TGATCAGCAT TCCTGGAACA 
ATTTTAACCC TTGTAGGGGG GATCATTTTT GGTTTATTAT GGGGGACTAT CTGGTCAGTT 
ATCGGGGCAA CGTTGGGAGC ATTAGGGGCA TTTTGGACAG CACGTTATCT ATTACGAGAT 
CTCGTTAAAC AAAAGTTTGC TCATCATCAA ACATTTATTA CGTTTAATCA AGGAATCACT 
CATCAACCGA TCGCGTTTGT TTTAGCGGTT CGGTTTGTGC CTATTTCTCC GTTTAATCTG 
GTTAATTTTG TCCTAGGATT AACTCCGATT CATTGGTTTC CCTATACCCT AGGGACTTTT 
GTGGGAATTA TACCGGGAAC ATTAGCTTAC ACTTGGTTAG GAGTAAGCGG AATAGAAGCT 
TTACAAGGAA GCGATCGTCT GTCGTTTTTC TTAGCCTTAA GCTTTTTAGG ATTACTGTCT 
ATTTTGCCAC TATTAGCCAA GAAAAAATCT ATTTAA
 
Protein sequence
MIKIKQHNYL RKKLANLLIS KRFWIGITLF IIALLFTLSP LKIIFNPNFL VNFFQANSSF 
AVPLFIIAYI ILSVISIPGT ILTLVGGIIF GLLWGTIWSV IGATLGALGA FWTARYLLRD 
LVKQKFAHHQ TFITFNQGIT HQPIAFVLAV RFVPISPFNL VNFVLGLTPI HWFPYTLGTF 
VGIIPGTLAY TWLGVSGIEA LQGSDRLSFF LALSFLGLLS ILPLLAKKKS I