Gene PCC7424_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2012 
Symbol 
ID7109480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2268704 
End bp2269363 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content44% 
IMG OID643480270 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002377310 
Protein GI218438981 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA CTTTGCCTAA TAACAAGACT TCTGATCAAA AAACCCGTCA TCATCATCCC 
CGTCCCATCA AAGTCTGGCA AGATGGGTCT CACGGTCAAG GAGAAGTACA AATTAATATA
GTGCCCCTAA TTGATGTTAT TTTCTGTATC TTGACCTTTT TTATTTTAGG AGCAGTGGGT
CTTTCCAGAC AGCAAGCCAT TGGGTTAGAT TTACCGAAAG CCGCCTCGGG GACTCCCCAA
ATGCGAGAAA TGTTGGTGGT TAGCCTCGAT AGCTTTGGTC AACTCTATGT GGAAAAACAG
TTAGTTACCC CTAATCAACT CGAAGAAGCC ATCAAAAACT ATCATCAGTT TAATCCCACC
GGGATGATGG TTCTCCATGC CTCCAAAGAT GCCAGTTATA GTGAAGTGGT TCAAGTGCTG
GATATGTTGA AAAAAGTAGG AGGCGATCGA GTCGCTTTGG CTACTTTGCC AGGAGAGGGA
GGATCTTTTA ATCAAACAAC ACCTAACTCT AATCCTTTCC CATCTGGGAC AAATCTTCCT
GGAGGAACTT ACAATTACGG TCAACAACAA TCACCCTCAT CTTTACCAGA AGGTTTTGGC
GGTAATCCTT CTATTCCTAA TGTTCCCAGC GCCCCAGGCA GCGCTCCTCA AACTAATTGA
 
Protein sequence
MTNTLPNNKT SDQKTRHHHP RPIKVWQDGS HGQGEVQINI VPLIDVIFCI LTFFILGAVG 
LSRQQAIGLD LPKAASGTPQ MREMLVVSLD SFGQLYVEKQ LVTPNQLEEA IKNYHQFNPT
GMMVLHASKD ASYSEVVQVL DMLKKVGGDR VALATLPGEG GSFNQTTPNS NPFPSGTNLP
GGTYNYGQQQ SPSSLPEGFG GNPSIPNVPS APGSAPQTN