Gene PCC7424_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1971 
Symbol 
ID7109439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp2216156 
End bp2216746 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content43% 
IMG OID643480229 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002377269 
Protein GI218438940 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG ATGATACTCG TACTCGTATT TTACAAGCTG CTCTGCGCTT ATTCGCCGCT 
AAAGGCTTTG ATGGCACAAC CACTAAAGAT TTGGCTACAG CCGCTAATGT GGCTGAGGGA 
ACATTGTTTC GTCACTTCAG CAATAAAAAA GCGATTTTGA TTGAAGTAGC TACTAATGGC 
TGGGTAGACA TTTTAACCGA TTTGTTGACC GAATTAAGCG AAATGGGCAG TTATAAAGCG 
GTAGCCCAAG TCATGCGACG GCGAATGCTA CGAGTTCGGG AAAATAGTAA TTTACTGCGG 
GTGTGTTTTA TTGAGGCTCA ATTTCATCCG GAATTACGCG ATCGCATTCA GTCTGAGGTA 
ATTAGTAAAA TGACGGATGT GGCGGAGGCT TTTTTTGAAA CCGCCATAGA TAAAGGGATT 
TACCGCCCAA TGAATCCGAA AATTGTGGCT CAAGTCTTTT TAGGAATGTT CGCTATTGCC 
GGTTTTTCTA ATCAAACGGT TCTCGAACCA GATGCCTCCC CCGCAGAGAT CAAGGAAATG 
GCAGAAGGAA TTGCGGATAT TTTTCTTCAT GGGGTTTTGG CTCAAGAATA G
 
Protein sequence
MTEDDTRTRI LQAALRLFAA KGFDGTTTKD LATAANVAEG TLFRHFSNKK AILIEVATNG 
WVDILTDLLT ELSEMGSYKA VAQVMRRRML RVRENSNLLR VCFIEAQFHP ELRDRIQSEV 
ISKMTDVAEA FFETAIDKGI YRPMNPKIVA QVFLGMFAIA GFSNQTVLEP DASPAEIKEM 
AEGIADIFLH GVLAQE