Gene PCC7424_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1894 
Symbol 
ID7109895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2122388 
End bp2123200 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content43% 
IMG OID643480154 
ProductSqualene/phytoene synthase 
Protein accessionYP_002377194 
Protein GI218438865 
COG category[I] Lipid transport and metabolism 
COG ID[COG1562] Phytoene/squalene synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.73181e-25 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAATTTC GTGATAATGC TTTAACGATA CTCAAAGAAA CAAGTCGGAC ATTTTATATT 
CCTATCAGTC GTCTCCCTGA TAAACTACAG GAAGCTGTGG CATCTGCCTA CCTGTGTATG
CGTGCCATTG ATGAAGTAGA AGATCATAAG ACCCTAGATA ACTTTACCAA AGCCAGAATT
TTACGTCAGA TTAGCCTCAA TTTACAGGCA GCAGCAGAAA ATACCACTGT AGATAATTTC
TCATCGGGTT TACTTTCTCA TCAAGATGTC CTTCCAGAAG TCACTATACG CCTGGGAGAA
TGGGCATTAC TCGCTCCTGA AACAATCGCT CCTCGCATTT GGGATGCGAC AGCAGCGATG
GCCGATCGGA TGGCTTATTG GGCTGAAAAT AACTGGAAAA TTGAAACCGT AACTGATTTA
GATCGCTATA CGTTTAGTGT AGCAGGTGCA GTCGGGTTAC TGCTTTCGGA TTTGTGGGGT
TGGTATGATG GAACTCAAAC TAACCGTACT TACGCCATCG GTTTCGGACG AGGGTTACAA
GCGGTTAATA TTGCCCGTAA TCATAGTGAA GATTTACGTA GAGGAGTCGA TTTTTTCCCT
GATGGATGGC GGGCTGAAGA AATGCACGCC TATGCCCGCC ATAATTTAAA ATTGGCTGAT
TATTATACTA AATCTCTTCC TGATGGGCCG GCCTTAGACT TTTGTAAAAT TCCCTTAGCT
TTAGCCTATG GAACGTTAGA AGTCCTCGCT TTAGGAAAAG AAAAATTAAG TCGTAGCGAT
GTTATGGCCT TGGTTCAACA AGTGAATCAC TAA
 
Protein sequence
MKFRDNALTI LKETSRTFYI PISRLPDKLQ EAVASAYLCM RAIDEVEDHK TLDNFTKARI 
LRQISLNLQA AAENTTVDNF SSGLLSHQDV LPEVTIRLGE WALLAPETIA PRIWDATAAM
ADRMAYWAEN NWKIETVTDL DRYTFSVAGA VGLLLSDLWG WYDGTQTNRT YAIGFGRGLQ
AVNIARNHSE DLRRGVDFFP DGWRAEEMHA YARHNLKLAD YYTKSLPDGP ALDFCKIPLA
LAYGTLEVLA LGKEKLSRSD VMALVQQVNH