Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1855 |
Symbol | |
ID | 7109856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 2064140 |
End bp | 2067997 |
Gene Length | 3858 bp |
Protein Length | 1285 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643480115 |
Product | GAF sensor hybrid histidine kinase |
Protein accession | YP_002377155 |
Protein GI | 218438826 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG2203] FOG: GAF domain [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACGAA AAATAGCTTA CTCTGGCAGA AAGTCAAATC GACTCTCGCG GCAATTCTTA AAAACAAATA GTCGCTTTAA GCAATTAGAG ACAGAAAAAC AACCTATATC TCTCCAAATA GATCGACAAA AGACGTTATT AGCCGTTATT ACTAAAATTC GGGAATCTCT CGATTTAACC ACTATTTTTA AGTCTACTGC TCAAGAAGTC CGTCAACTCC TCAACGCCGA TCGGGTGGGG ATCTTTCGCT TTTTTCCCGA TTCCAATTGT ACGAAAGGGG AATTCGTGGC TGAAGATGTT TTACCGCCCC TAGAATCTAC CCTAGACTTT ATTATTGAGG ATAGCTGTTT TCAGCAGAAC TATACCGCGA AATATCAACA AGGAAAAATT TATGCCATTG AGGATGTTGA AACAGCAACC CTCGAAGAGT GTTATCTCGA TCTACTGAAA AAATTTAACA TCCGAGCGAA TTTAGTTGTT CCTTTACTCC ACGAACAACA GCTATGGGGA TTATTGTGTA TTCATCAATG TCGCCAACCC CGACAATGGC AAGAATCAGA GATAGAATTT ATTAGTCAAA TCGCCCTACA TTTAGGCATA GCGGTACAAC AAGCTGAAAA AATAGCCCAA TTACAAGGAA AATCCGCTCA ACTGAGTGCT TCTATTCAAC GAGAAAAAGC ACTCGCCACC ATTGTCAATA AAATTCGTCG TTCCCTCAAT CTCAATACCA TTTTTCAAAC CACTACCCAA GAAGTCCTAG AGTTAATTAA AGCCGATCGG GTGGCAATTT ATCGGTTTAA TTCTGATTGG AGTGGAGAAT TTATTGTTGA TTCTGTTACC TCCCAATGGA CTTCTTTAAT GAAGACTCAA TTGATTCATA CAGAACTCTG TGAAAATATT AGCGAATGTA GCGTTAAAAA TTTAGTTAAC CCGCAACTCA CAGATACTTA TCTCCAAAAA ACTCAAGGGG GACAATTTTC CCAAAATGAC TTATTTCGGG TGTGTAATGA TATTTATCAT GCCGGGTTTT CTGACTGTTA CATCAATATT TTAGAACTCT GTCAGGCGAG AGCTTATGTC ATCGTCGCCA TTTATGAAGG GGAAAAATTA TGGGGGTTAC TCGCCACTTA TCAAAATTCG GGGGTTCGTC ATTGGCAGGA AACAGAAGTT AATTTCTTAG TGCAAATTGC GGCACAGTTA GGAGTAGCTA TTCAACAAGC GGAATTACTG GCTCAAACTC AAAAACGCTC TGATCTCCTG CAAACTACTC TCGATACAGA ATTAAAAAAA CGAGCGGAAG AATTAGCCTT GGAAGCGAAA CAAGAAAAAG TTTTAGCGGA AGTCATCGAT AAAATTCGTC AAACTCTCGA TCTTGATACC ATTTTTCAAA CCGCTACCCG TGAAATTCGT CATCTCCTCA CAGCAGATCG AGTGGGAATT TTTCAGTTTA ACCCGAATTC TAATTGTCAA CAAGGAGAAT TTATTTCCGA GGATTTTACG CCCCCTTATT CCTCAGTTTT AGAAGAAAAA GTTGAGGATC ATTGTTTTGG AGAACACCAT GCTAATTACT ATCAAGAAGG TCAGATTTTT GCCATTGCCG ATATTACCCA AGCCGGTTTA AGTGAATGTC ACCATGATAT TCTCTCTCGG TTTCAAGTTA AAGCGAATTT GGTTTTCCCC TTACTCAAAA ATGATCAACT TTGGGGGTTA TTGTGTATTC ATCAATGTAG TGCCCCTCGC TTCTGGCAAC CTCAAGAAAT CGAATTTGTC CGTAAAATTA CGGTTCAGTT AGGGGTAGCC CTACAACAAG CGGAATTATT AGTACAAGCA CACAATCGTT CCGCCGAATT GAGTCAAGCG TTAGCCCAAG TAGAAGCGCA AAAAGAACAA CAAGCGCAAG TCGCCCAACA AGAACGGACT TTAGCCCGCA TTATTGAACA GGTTCGCCAA ACTTTAGACA TTGATACCAT TTTTGGGGCA ACCACTCACG AACTTCGACA AGTGTTAAAC TGCGATCGAG TAGTCGTCTA TCGTTTTTTT GCAGATTGGA ATGGAGAATT TGTCTATGAA TCCATGAGTG AAGGTTGGAT GCCTTTAATT GTCGGTAATA CTAAAACCGT TTGGCGAGAT ACCTACTTTC AAGATACCCA AGTTAGTCGG TATCACAATC ATGAAACCTT TGCCGTTGAT GATATTTATC AAGCAGATTT AACCCCATGT CATCTGGAAA TGTTAGAACT TTTTCAAATC AAAGCTTATA TCGTTGCACC GGTTTTTGTT GGGGATAAAC TGTGGGGTTT ACTCGGCGCT TATCAAAATA CAAATCCTCG TCACTGGGAA GACAGAGAAA TCTCTTTAAT GGCAAGAGTA GGAGATCAAT TAGGGGTTGC TATGCAACAG GCCGAACTTC TTGAACAACT GACAAAAGCC AAAGAAACTG CTGATGCTGC TAATAAAGCT AAAAGTGAAT TTCTCGCCAA TATGAGTCAT GAATTACGAA CCCCTCTCAA CGCCATTTTA GGGTTCACTC AATTATTAGC TAGGGATTCT TCTTTAAGTG ATAAACAACA CGAATATGTA GGCATTATTG GCCGATCTGG AGAACATTTA CTCAGTTTAC TCAATGATGT TTTAGAAATG TCGAAGATTG AGGCGGGTCG AATTACTCTT AATGAAAATC ACTTCGATTT ATACCGTCTT TTAAATACTT TAGAAGAAAT GTTTCAATTA AAAGCACAAT CAAAAGGATT ACAGTTAATT TTTGATTGTC ATCCTGACGT TCCTCAATAT ATTAAAACCG ATGAAAGTAA ACTGCGTCAG ATTTTAATTA ATTTAATCGG CAATGGCATT AAATTTACAG AAGTAGGCAG TGTTATTTTA AGGGTTAAGC TATCACTCTT AAGCACCATG ACTATTGATT TTGAAGTAGA AGATACCGGA TTAGGCATAG CTCCCGAAGA ACTCGATACC TTATTTCAAC CCTTTATCCA GACGGTAAGC GGACGCAAAT CTCAAGAAGG AACAGGTTTA GGATTACCCA TTAGTCAAAA ATTTGTCCAA TTAATGGGAG GAAATATCTC AGTTAAGAGT AACCTAAATA AAGGCTCTAT GTTTAGGTTT GAAATTCCTT TTACTCAAAG TGAATCCGCC CAAGTTTCCC AACCCATTAA AGATCTTCAA ATTATAGGAT TAGAACCTAA TCAACCCATT TATCGGATTC TCATTGCTGA TGATAAATGG GAAAGTCGTT TGATGTTAGT TAATCTTTTA TCTCCCCTTG GATTTGAAGT TCGTGAAGCA GAAAATGGAC TCCAAACCGT TGAACTTTGG CAAAGTTGGA GTCCTCATCT AATATGGATG GACATGAGAA TGCCGTTGAT AGATGGGTAT CAAGCTACAA AACAGATTCG AGAAAAAGAG TCTATGACTT CCACTCAACA GCGAACTAAA ATTATAGCTC TAACCGCCAG TGTTTTAGAT ACACAAAGAA TGACCGTTTT TAATGCAGGG TGTGACGATT TTGTGGCTAA ACCTGTCCGA AAAGAAAAGG TTTTTGAGAA GATAGCTGAA CATTTAAAGG TTCGATATAT TTATCAACAA GAGACTCAAC CTAAACCTCA ATCTCAACCC TTACTTTTAT CCAATTTTGA GAGTTTAAAA TCAGCGATCG CACAAATGCC CCAAGAGTGG ATCACTGGCT TGAAAAATGC TGTTCTGAGT GCTAGAGAAA AAAGAATTCG TCAGTTAATT GAACAAATTC CTCAACAGGA TTCTCCTCTG GTTAAGACTT TAACCCAATT CCTCAATAAT TTAGCTTATG AGAAAATATT AGAGTTAATT AATGTTGACT TAAATTAA
|
Protein sequence | MSRKIAYSGR KSNRLSRQFL KTNSRFKQLE TEKQPISLQI DRQKTLLAVI TKIRESLDLT TIFKSTAQEV RQLLNADRVG IFRFFPDSNC TKGEFVAEDV LPPLESTLDF IIEDSCFQQN YTAKYQQGKI YAIEDVETAT LEECYLDLLK KFNIRANLVV PLLHEQQLWG LLCIHQCRQP RQWQESEIEF ISQIALHLGI AVQQAEKIAQ LQGKSAQLSA SIQREKALAT IVNKIRRSLN LNTIFQTTTQ EVLELIKADR VAIYRFNSDW SGEFIVDSVT SQWTSLMKTQ LIHTELCENI SECSVKNLVN PQLTDTYLQK TQGGQFSQND LFRVCNDIYH AGFSDCYINI LELCQARAYV IVAIYEGEKL WGLLATYQNS GVRHWQETEV NFLVQIAAQL GVAIQQAELL AQTQKRSDLL QTTLDTELKK RAEELALEAK QEKVLAEVID KIRQTLDLDT IFQTATREIR HLLTADRVGI FQFNPNSNCQ QGEFISEDFT PPYSSVLEEK VEDHCFGEHH ANYYQEGQIF AIADITQAGL SECHHDILSR FQVKANLVFP LLKNDQLWGL LCIHQCSAPR FWQPQEIEFV RKITVQLGVA LQQAELLVQA HNRSAELSQA LAQVEAQKEQ QAQVAQQERT LARIIEQVRQ TLDIDTIFGA TTHELRQVLN CDRVVVYRFF ADWNGEFVYE SMSEGWMPLI VGNTKTVWRD TYFQDTQVSR YHNHETFAVD DIYQADLTPC HLEMLELFQI KAYIVAPVFV GDKLWGLLGA YQNTNPRHWE DREISLMARV GDQLGVAMQQ AELLEQLTKA KETADAANKA KSEFLANMSH ELRTPLNAIL GFTQLLARDS SLSDKQHEYV GIIGRSGEHL LSLLNDVLEM SKIEAGRITL NENHFDLYRL LNTLEEMFQL KAQSKGLQLI FDCHPDVPQY IKTDESKLRQ ILINLIGNGI KFTEVGSVIL RVKLSLLSTM TIDFEVEDTG LGIAPEELDT LFQPFIQTVS GRKSQEGTGL GLPISQKFVQ LMGGNISVKS NLNKGSMFRF EIPFTQSESA QVSQPIKDLQ IIGLEPNQPI YRILIADDKW ESRLMLVNLL SPLGFEVREA ENGLQTVELW QSWSPHLIWM DMRMPLIDGY QATKQIREKE SMTSTQQRTK IIALTASVLD TQRMTVFNAG CDDFVAKPVR KEKVFEKIAE HLKVRYIYQQ ETQPKPQSQP LLLSNFESLK SAIAQMPQEW ITGLKNAVLS AREKRIRQLI EQIPQQDSPL VKTLTQFLNN LAYEKILELI NVDLN
|
| |