Gene PCC7424_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1718 
Symbol 
ID7108599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp1893173 
End bp1894150 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content39% 
IMG OID643479980 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_002377021 
Protein GI218438692 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones1 
Fosmid unclonability p-value3.07332e-23 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGTTT TATATATCAC TCAACCTGAT GGGGTTTTAA GTAAAAAACA AGAGGCGTTT 
AATGTGGCTC TAAAACAGGA GGATGGCTCT TGGCAAAAAC AATCTATTGC GGCTCAAACG 
GTTGAACAAA TTGTTTTAAT TGGGCAACCG AGTATTACGG GAGAAGCTCT AAGTTATGCT 
CTAGAGTTAG GGATTCCGGT TCATTATTTG TCGAGTTTCG GGAAATATTT AGGCTCGGCA 
TTGCCGGGAT TTTCTCGGAA TGGACAGTTA AGATTAGCTC AGTATGCTGT TCATAATGAT 
AATGATAAAA GGTTGGCTTT GGTAAAAACA ATTGTCAGGG GGAAAATTCA TAATCAGTAT 
CGCCTTCTCT ACCGTTATGG ACAGAACCAA AATTCCCTCA AATTACGTAA AAAATCGGTG 
CAAAATCAAT CCAATTTAAA TCAAGTTCGA GGAGTTGAAG GGATAGCAGC TAGAGAATAT 
TTTCAAGAAC TTTCTAATAT TTTAGAAGAC CAATGGAAAT TTAATGGCAG AAATCGCCGC 
CCTCCAAGAG ATCCGATTAA TGCGTTATTG AGTTTTGCTT ATGGATTATT GCGAGTACAA 
GTAACGGCGG CGGTTCATTT AGCCGGTTTA GATCCTTACA TTGGTTATCT TCATGATACG 
ACTAGAGGAC AACCGGCGAT GGTGTTAGAT TTGATGGAAG AATTTCGCCC TTTGATTGCT 
GATAGTTTGG TGTTGTCTAT TATCAGTCAT AAGGAAATTA ACGCTGATGA TTTTGAGGAA 
AGTTTAGGCG CTTATCGTTT GCTAGATGGG GGAAGGAAAG CTTTTTTACA AGGGTTTGAA 
CGAAAGATGT CTTCGGAGTT TAAACATCCT TTGTTTGGTT ATCAGTGTAC TTATCGTCGG 
GCGGTGGAAT TACAAGCTCG TTTGTTAAGT CGTCATCTCC AAGAAGAAGT TCCTTATCAA 
TCTTTTAGAA TCCGATGA
 
Protein sequence
MSVLYITQPD GVLSKKQEAF NVALKQEDGS WQKQSIAAQT VEQIVLIGQP SITGEALSYA 
LELGIPVHYL SSFGKYLGSA LPGFSRNGQL RLAQYAVHND NDKRLALVKT IVRGKIHNQY 
RLLYRYGQNQ NSLKLRKKSV QNQSNLNQVR GVEGIAAREY FQELSNILED QWKFNGRNRR 
PPRDPINALL SFAYGLLRVQ VTAAVHLAGL DPYIGYLHDT TRGQPAMVLD LMEEFRPLIA 
DSLVLSIISH KEINADDFEE SLGAYRLLDG GRKAFLQGFE RKMSSEFKHP LFGYQCTYRR 
AVELQARLLS RHLQEEVPYQ SFRIR