| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1687 |
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| Symbol | sdhA |
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| ID | 7108568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 1862147 |
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| End bp | 1863874 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643479950 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002376991 |
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| Protein GI | 218438662 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0263858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAAC ATGATGTGAT TATTATTGGC GGTGGTTTAG CTGGATGTCG TGCCGCCCTA
GAAATTAAAC GTCTTACCCC TAATGTTGAT GTGGCTGTTA TTGCGAAAAC TCATCCCATT
CGTTCCCATT CGGTGGCGGC ACAGGGAGGA ATAGCCGCGA CTCTGCAAAA TGTCGATCCG
GAGGACTCTT GGGAAGCTCA CGCCTTTGAT ACCGTAAAAG GATCAGACTA TTTAGCCGAT
CAAGATGCGG TAGAATATCT CACCAAAGAA GCGCCAGAAG TCATCATTGA CTTAGAACAT
ATGGGAGTGC TTTTCTCCCG CCTCGAAGAT GGAAGAATTG CTCAACGGGC TTTTGGGGGA
CATTCCCATA AGCGCACCTG CTACGCCGCC GATAAAACCG GCCATGCTAT GCTCCACGAA
TTAGTGAATA ATTTGCGCCA CAACGGGGTA CATATCTATG ACGAATGGTA TGTCATGGAC
TTGATCCTTG AGGCAGGAGA AGCCAAAGGT ATCGTTATGT ATCATATCCT GGATGGACAA
CTAGAAATTA TCCGGGCAAA AGTGGTCATG TTTGGAACGG GAGGATATGG CCGAGTCTTT
AACACTACTT CTAATGACTA CGCCTCTACT GGGGATGGGT TGGCCATGTC CGCCTTGGCA
GGTGTTCCCC TAGAAGATAT GGAGTTTGTC CAATTTCACC CCACAGGGTT GTATCCGGTT
GGGGTGTTGA TCTCAGAAGC GGTACGGGGA GAAGGGGCTT ATCTGCGTAA CGTTGACGGG
GAGCGCTTTA TGGAACGTTA CGCCCCCAAA CAGATGGAAC TCGCCCCCAG AGATATTACC
TCTCGCGCCA TCTCCCTAGA AATTCGCGCC GGACGGGGTA TTCATCCCGA TGGAAGTGCG
GGCGGGCCTT TTGTGCATTT AGATCTTCGC CACATGGGGA AAGACAAAAT TATGAGTCGA
GTTCCTTTCT GTTGGGAAGA AGCTCATCGA CTCGTCGGTG TAGACGCAGT GAATGAACCG
ATGCCGGTGC GTCCTACTGT TCATTATTGC ATGGGAGGTA TTCCGGTTAA CACTGATGGT
CAGGTGCGCC GCAGTGCGGA CAGTTTAGTC GAAGGGTTTT TTGCCGCCGG AGAATGCGCC
TGTGTGTCGG TACATGGGGC TAACCGTTTA GGCAGTAATT CTCTATTAGA ATGTGTGGTT
TATGGACGGC GAACCGGTAG AAGTATTTCT CAATACGTTC AAAAGCGTCA ATTTCCGGAA
TTTGACCCTC AATTATATCT CAATAAAGCT CAGGAACGGA TTCAAAAGTT ATTAGCTCAA
AAGGGAACAA TTCGTATAGC CAAATTACGT CAAAAATTCC AAGATTGTAT GAGTGAACAT
TGTGGCGTTT TCCGCACCGA AGAAATTATG CGGGAAGGGT TAGCCAAATT GCAAGATTTA
AAACAACAGT ATTCTCAAAT TTATCTCGAT GACAAGGATA ACTGTTGGAA TACAGAGTTA
ATTGAAGCAA TGGAATTACA AAGTATTATG GTGGTGGGTG AGTTAATTTT AACCTCTGCC
CTTAACCGTC AAGAAAGCCG AGGGGCACAC TCTAGAGAAG ATTATCCCAG TCGGGATGAC
AGCAACTTTT TACAACATAC TTTGGCTTAT TATTCCCCCG CAGGAATTGA TATTAATTAT
ATGCCTGTTG TGATTACTAT GTTTGAACCA AAGGAAAGGA AGTATTAA
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| Protein sequence | MLQHDVIIIG GGLAGCRAAL EIKRLTPNVD VAVIAKTHPI RSHSVAAQGG IAATLQNVDP
EDSWEAHAFD TVKGSDYLAD QDAVEYLTKE APEVIIDLEH MGVLFSRLED GRIAQRAFGG
HSHKRTCYAA DKTGHAMLHE LVNNLRHNGV HIYDEWYVMD LILEAGEAKG IVMYHILDGQ
LEIIRAKVVM FGTGGYGRVF NTTSNDYAST GDGLAMSALA GVPLEDMEFV QFHPTGLYPV
GVLISEAVRG EGAYLRNVDG ERFMERYAPK QMELAPRDIT SRAISLEIRA GRGIHPDGSA
GGPFVHLDLR HMGKDKIMSR VPFCWEEAHR LVGVDAVNEP MPVRPTVHYC MGGIPVNTDG
QVRRSADSLV EGFFAAGECA CVSVHGANRL GSNSLLECVV YGRRTGRSIS QYVQKRQFPE
FDPQLYLNKA QERIQKLLAQ KGTIRIAKLR QKFQDCMSEH CGVFRTEEIM REGLAKLQDL
KQQYSQIYLD DKDNCWNTEL IEAMELQSIM VVGELILTSA LNRQESRGAH SREDYPSRDD
SNFLQHTLAY YSPAGIDINY MPVVITMFEP KERKY
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