| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1635 |
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| Symbol | |
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| ID | 7109635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 1801605 |
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| End bp | 1803362 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643479900 |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_002376941 |
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| Protein GI | 218438612 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.309745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TTCAACTCCA AAAAAAACGC CACTGGCAAA AGGGGGTGCT AGTTAGTGCT
TGTTTGGTGA CAATGGGCTT AATTTCGGAA AAAACTCAGG GATTAGCTTA TGCTATCCCA
GGATCTCCTG ATATTTTTAG ATTAAAAAAT CAAGAGAAAA AATTTTCCGA TTCTATTGCT
AATTTTCCGT TAAATTCGCC TGAAATTATC GGTCAAAATA ACAATAATAA AACTCCAATT
CTAATAGAAA AAGTCCAGGT AGAAGGAAGC ACCGTATTTA CATCTGAAGA TTTTGCGCCC
ATTATCCAAC CAATAGAAGG AAAAACCGTT ACACAACAAC AATTAAGAGA AGTGGTGAGT
GCTATCACCC AACTCTACAT CAATGAAGGA TATCTTAACT CTAGAGCGGT ATTAGTGGGG
ATCAGCGATG GAGTAGCGGT GATCGCCATT TCCGAAGGGA CGATTGGCAA CATTGAGATT
GAAGGAACGA CAAGATTACA AAATTATGTT CGTTCTCGGA TAGAATTAGG CATCGGCACG
CCCCTGAATG CCCGAAAATT AGAAGATCAA CTGCGCTTAC TCAGAAGCGA TCCCCTCTTT
AAAAACGTAC AAGCGACTCT ACAACCCCCC CAAGAAGACA CACCCGTCAC ACCCGGAGAA
GAAAAAGCCA GGAGTACCCT AGTCGTAACT GTGACAGAAG CCGATCCTTT TGCCGGCAGT
GTGGGAGCAG ATAATTATTC CCCGCCGAGT ATAGGCGCAA CCCGGTTTAA TCTTAATCTG
CTGTATCGCA ATCTTACGGG AATAGGGGAT CAAATAGCCA CCTCTTACCG TCCCCGTTTT
GAAACTTGGG ATGGGACTTA TAGTCTAGAC TTGGCCTATC GCGCTCCCCT CAACCCGATG
GATGGAGCAA TTACGTTTAA TGCTTTAATT GAGCGAAACC GAGTGATTCA AGGGGTAGAA
AACATCGATC TTCTCAATAT TGGGGGGAAT TCAGAACGCT ATACCCTCGA CTACCGACAA
CCTCTGAAGA GGACAACCCG GGAAGAATTA GCCTTATCTA CGGGATTTAG CTATTATAAT
GGTCGGACAT TTCTCGATGA TGAACCGTTT CCTTTTGGGT TTGGCCCTAA TGACCAAGGG
GTGACCATTA CCAGTGTATT TACCTTTGGA CAAGAATACA TCCGTCGTCA AAGAACTGGT
GCGTGGGGGG TACGTTCTCA ATTTCGCTTT GGAACGGGTT TATTTGAAGC AACGGATAAT
AACGATCGCA TTCCCGATGG CTATTTTTTC ACTTGGTTGG GTCAAGTTCA ACGATTACAA
GTGATTAATC CGGATAATGT TTTAATTATT CAACTCGATT TACAGTTAAC GCCGGATACC
TTGTTACCTT CAGAACAGTT TGTCATTGGG GGAGCGCAAT CCGTTCGCGG TTATCGTCAA
AATGTGATGG CCGGCGATAA TGGAGCGCGG TTTTCTATTG AAGATCGTAT TACCCTCGTC
CGGGATGAAC AAGAAAATCC CGTGTTTATC TTAGCTCCTT TTTTTGATTT AGGAGCAATT
TGGAATTCTG AAGATAATCC TAATAGAATT GTCGCCAGTC AGACCGTTAT TGCTGGGTTA
GGATTAGGGG TAATTTGGCA ACCGATCGAA AAGTTAAATA TTCGACTCGA TTATGCCCCT
CCTTTAATGG ATCTCAATAT TCGTCGTGAT AATGTTCAAG ATGATGGATT TTATTTTAGT
ATTAATTACG GCTTCTAG
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| Protein sequence | MKTIQLQKKR HWQKGVLVSA CLVTMGLISE KTQGLAYAIP GSPDIFRLKN QEKKFSDSIA
NFPLNSPEII GQNNNNKTPI LIEKVQVEGS TVFTSEDFAP IIQPIEGKTV TQQQLREVVS
AITQLYINEG YLNSRAVLVG ISDGVAVIAI SEGTIGNIEI EGTTRLQNYV RSRIELGIGT
PLNARKLEDQ LRLLRSDPLF KNVQATLQPP QEDTPVTPGE EKARSTLVVT VTEADPFAGS
VGADNYSPPS IGATRFNLNL LYRNLTGIGD QIATSYRPRF ETWDGTYSLD LAYRAPLNPM
DGAITFNALI ERNRVIQGVE NIDLLNIGGN SERYTLDYRQ PLKRTTREEL ALSTGFSYYN
GRTFLDDEPF PFGFGPNDQG VTITSVFTFG QEYIRRQRTG AWGVRSQFRF GTGLFEATDN
NDRIPDGYFF TWLGQVQRLQ VINPDNVLII QLDLQLTPDT LLPSEQFVIG GAQSVRGYRQ
NVMAGDNGAR FSIEDRITLV RDEQENPVFI LAPFFDLGAI WNSEDNPNRI VASQTVIAGL
GLGVIWQPIE KLNIRLDYAP PLMDLNIRRD NVQDDGFYFS INYGF
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