Gene PCC7424_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1554 
Symbol 
ID7110611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand- 
Start bp1713780 
End bp1714880 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content41% 
IMG OID643479818 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_002376862 
Protein GI218438533 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0582053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTA AAAGATCTTC TCAAGATCCT CATTCCCCCT TACACCCCCC TCACATTTCC 
CCGTCAGAAA AAAAAAATAA GCCTCATCAA GACCATCGAC TTCTAGAAAC GGGTAGGTTA 
GAAGAAACCG AAGCGGCAGA AGATTCTATT CGGCCTCGTA ATCTGAATGA TTATATCGGG 
CAAAAGGAAT TAAAAGAAGT ATTGAAAATT GCCATCGGAG CGGCTAAAGT CAGAAAAGAG 
GCTTTAGATC ACCTTTTATT GTATGGCCCT CCCGGATTAG GGAAAACAAC GATGGCTCTC 
ATTTTAGCGG CTGAGATGGG GGTAAATTGT AAAATTACCG CCGCCCCGGC TTTGGAACGT 
CCTAGAGATA TTACCGGTCT TTTGATTAAT CTTAAACCTG GGGATATCCT CTTTATTGAT 
GAAATTCATC GTCTCAACCG TATGAGTGAA GAATTACTTT ATCCGGCTAT GGAAGATCAA 
CGTCTTGATA TTACCACCGG AAAGGGTAAA TCTGCCAAAA TTCGCAGTAT TCCTTTATCT 
CCCTTTACCT TAATCGGAGC AACCACTAAA ATAGGGGCAT TAACTTCACC TTTGCGCGAT 
CGCTTTGGGT TAATTCAACG CCTCAGATTT TATGAGGTGG ATGAACTTTG TTTAGTTGTG 
TTAAGAACGG CAAAGATTCT TAATGCTAAA ATTAAGGAAG AGGGGGCGTT AGAAATTGCC 
CGACGTTCTA GGGGAACTCC TCGTATTGCT AACCGTTTAT TAAAGCGAGT CCGAGATTAT 
GCCCTAGTTA AAAAGATAGA ATCGATTACA GAGGCTTTAG CGGCAGAAGC GTTAGATAAA 
TTAAATGTGG ATAGTCGGGG TTTAGATTGG ACGGATAGAT TAGTTTTAGA TACAATTATA 
CAGCAGTTTC GAGGGGGGCC GGTCGGGTTA GAAACGGTGG CTGCCGCAAC GGGAGAAGAT 
GCCAAAACCA TTGAGGAAGT TTATGAACCT TATTTATTAC AAATTGGGTA TTTAAATCGA 
ACCTCTAGAG GCAGAATAGC AACGGAAGCC GCCTATCAAC ATTTAGGCTA TGATTATATA 
TTCAACCGTA AAATAAATTA A
 
Protein sequence
MAIKRSSQDP HSPLHPPHIS PSEKKNKPHQ DHRLLETGRL EETEAAEDSI RPRNLNDYIG 
QKELKEVLKI AIGAAKVRKE ALDHLLLYGP PGLGKTTMAL ILAAEMGVNC KITAAPALER 
PRDITGLLIN LKPGDILFID EIHRLNRMSE ELLYPAMEDQ RLDITTGKGK SAKIRSIPLS 
PFTLIGATTK IGALTSPLRD RFGLIQRLRF YEVDELCLVV LRTAKILNAK IKEEGALEIA 
RRSRGTPRIA NRLLKRVRDY ALVKKIESIT EALAAEALDK LNVDSRGLDW TDRLVLDTII 
QQFRGGPVGL ETVAAATGED AKTIEEVYEP YLLQIGYLNR TSRGRIATEA AYQHLGYDYI 
FNRKIN